G1183432


Basic Information

Item Value
gene id G1183432
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 48904228 ~ 48905481 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1349639
TGTCTGTCTATTGTGATTGGACAGAGCACGTCCTTGGTTTTCCAGTCTCTGTAGTGTGATTAGACAAATACCTTCCCTGCTGTCCCGTCGCTGTGTGCGATTGGTGACCTTCCTGGTTGACCGGTCTCTGTTGTTGTATTGGTTGCCTAAGGTTATTGATTTAAAACAGGGCAGCAGTCAATGGAATGTCTGTGGGAGGTTTGTGTTCCTTTGTGGCTGTGAGCGTCTCAGTATAGAGTGTTGTATGGAGGAAGAGATGAGTCTCTACGTGTCTGAAGGCATATTTATCAGTAAATAATGAGGCTCTAAATATTTTGCTTCTAGTAAATTGCACAGCCAGACCTTGATTACTATTGTTGCTATGTCACCAACACTGCCTCCTGCTCCATTCCATTCCTTTCTACTTAcctttcatctcctcctctccctcctttcatctAATGTCCATATcgctcctttctctcccctctttctcataccatctcattctctctcacagacacatccATACACATTCTCTTTCTCATaccatctcattctctctcacagacacatccATACACATTCTCTTTCTCATaccatctcattctctTTCTCATACCATCTCATTCTCTTACACAGACACATCCAtacacattctctttctctcccctctcttttcctgCCTCCCCCTGATGTTCTTGCTGCCATTTGAGAGGACCAGAGACAGCCATTCCTCAGATTGAGATATGCTGGGTTTTAAAGTCACACTCAGAAAGATTTACTATCTCAGTCTggatggagggaagtggagcggGGATACAGACTGGGGTGTTGGGTTGGGGGTAGCGTTTTAATACGCTAATCTCAGgctcatttttttttacaatggagCGAGCTGAGATGGACAGATAAATGGACCTAGTTGAGTCTGAGATTCCTTTCTGAACCTGTTCCAGATGAATTAGCCTAATATGCCTATCAGAAGTTttcagatagagagaaagagtgtgtttgagagtgagagagagagagggagagagagagaaagagaaagagagaaagagtgtgtttgagagagagtgagagagagatgaggaaggagaAATGGCACCAACATGTCCTGTCCTGAGTCTTGTCCTGATTGAAATGTGTCTCTTCTTAATGCTGTGATGGATTGATGGCCAGGGAGATAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1349639 True 1176 lncRNA 0.44 2 48904228 48905481

Neighbor

gene id symbol gene type direction distance location
LOC110486655 LOC106601541 coding downstream 31381 48858248 ~ 48872847 (-)
LOC110486654 LOC106606919 coding downstream 72352 48824468 ~ 48831876 (-)
LOC110486652 LOC106606918 coding downstream 165157 48731139 ~ 48739071 (-)
LOC110486651 LOC106601513 coding downstream 179452 48705713 ~ 48724776 (-)
LOC110486649 LOC106606880 coding downstream 206250 48689028 ~ 48697978 (-)
LOC110486657 LOC106595301 coding upstream 41247 48946728 ~ 48956570 (-)
LOC110485205 LOC106597701 coding upstream 55424 48959315 ~ 49053966 (-)
LOC110486659 LOC106601577 coding upstream 159850 49065331 ~ 49078168 (-)
LOC110487553 NA coding upstream 173644 49079125 ~ 49081022 (-)
LOC110486660 LOC103034594 coding upstream 175952 49081433 ~ 49096321 (-)
G1183396 NA non-coding downstream 97080 48806938 ~ 48807148 (-)
G1183375 NA non-coding downstream 108211 48790151 ~ 48796017 (-)
G1183379 NA non-coding downstream 131357 48764009 ~ 48772871 (-)
G1183363 NA non-coding downstream 162136 48741813 ~ 48742092 (-)
G1183362 NA non-coding downstream 162759 48741238 ~ 48741469 (-)
G1183436 NA non-coding upstream 34891 48940372 ~ 48940591 (-)
G1183444 NA non-coding upstream 72052 48977533 ~ 48977865 (-)
G1183463 NA non-coding upstream 112853 49018334 ~ 49018591 (-)
G1183468 NA non-coding upstream 119080 49024561 ~ 49024785 (-)
G1183337 NA other downstream 236146 48667788 ~ 48668082 (-)
G1183225 NA other downstream 433245 48435826 ~ 48470983 (-)
G1183196 NA other downstream 514510 48379267 ~ 48389718 (-)
G1183192 NA other downstream 527262 48364056 ~ 48376966 (-)
G1183190 NA other downstream 539128 48361598 ~ 48365100 (-)
setd1a LOC106585476 other upstream 450897 49346540 ~ 49361234 (-)
LOC110486687 LOC106601611 other upstream 581445 49486817 ~ 49504819 (-)
LOC118938314 NA other upstream 631718 49537199 ~ 49544276 (-)
G1183706 NA other upstream 779857 49685338 ~ 49688456 (-)

Expression


Co-expression Network