G1182554


Basic Information

Item Value
gene id G1182554
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 48977516 ~ 48977900 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1348601
AGCGTGAGTAGACCACAGGGTTCTACAGACGGGTTTAGAGAGTAGTGGAGCGTGAGTAGACCACAGGGTTCTACAGACGGGTTTAGAGAGTAGTGGAACGTGAGTAGACCACAGGGTTCTACAGACGGGTTTAGAGAGTAGTGGAGCGTGAGTAGACCACAGGGTTCTACAGACGGGTTTAGAGAGTAGTGGAGCGTGAGTAGACCACAGGGTTCTACAGACGGGTTTAGAGAGTAGTGGAACGTGAGTAGACCACAGGGTTCTACAGACGGGTTTAGAGAGTAGTGGGGCGTGAGTAGACCACAGGGTTCTACAGACGGGTTTAGAGAGTAGTGGAGCGTGAGTAGACCACAGGGTTCTACAGACGGGTTTAGAGAGTAGTGGA

Function

NR:

description
PREDICTED: mucin-2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1348601 True 385 lncRNA 0.52 1 48977516 48977900

Neighbor

gene id symbol gene type direction distance location
LOC110486658 NA coding upstream 18314 48957777 ~ 48959202 (+)
LOC118938635 NA coding upstream 18751 48958678 ~ 48958765 (+)
LOC118938636 NA coding upstream 19006 48958422 ~ 48958510 (+)
LOC118938637 NA coding upstream 19240 48958189 ~ 48958276 (+)
LOC110486653 LOC106601538 coding upstream 181488 48748015 ~ 48796028 (+)
LOC110486662 LOC106606881 coding downstream 122107 49100007 ~ 49104036 (+)
LOC118936277 prf1 coding downstream 157051 49134951 ~ 49138251 (+)
LOC110486671 LOC100335037 coding downstream 220946 49198846 ~ 49202693 (+)
LOC110486670 LOC106606891 coding downstream 232565 49210465 ~ 49213419 (+)
LOC110486678 NA coding downstream 285629 49263529 ~ 49266771 (+)
G1182550 LOC106594513 non-coding upstream 4445 48971874 ~ 48973071 (+)
G1182547 NA non-coding upstream 18314 48957795 ~ 48959202 (+)
G1182542 LOC106595301 non-coding upstream 20957 48949888 ~ 48956559 (+)
G1182540 NA non-coding upstream 32549 48944407 ~ 48944967 (+)
G1182492 NA non-coding upstream 98271 48875674 ~ 48879245 (+)
G1182556 NA non-coding downstream 3654 48981554 ~ 48982061 (+)
G1182557 NA non-coding downstream 7274 48985174 ~ 48985475 (+)
G1182560 NA non-coding downstream 11769 48989669 ~ 48989912 (+)
G1182562 NA non-coding downstream 16533 48994433 ~ 48994681 (+)
G1182578 NA non-coding downstream 43850 49021750 ~ 49021956 (+)
G1182541 NA other upstream 29547 48946749 ~ 48947969 (+)
G1182354 LOC106601550 other upstream 415892 48556014 ~ 48561624 (+)
G1182153 NA other upstream 854941 48119613 ~ 48122575 (+)
G1181955 NA other upstream 1234452 47742361 ~ 47743064 (+)
G1181636 NA other upstream 1427968 47549279 ~ 47549548 (+)
G1182555 NA other downstream 100 48978000 ~ 48981403 (+)
G1182595 NA other downstream 85885 49063785 ~ 49065142 (+)
G1182629 NA other downstream 137075 49114975 ~ 49118697 (+)

Expression


Co-expression Network