G1182555


Basic Information

Item Value
gene id G1182555
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 48978000 ~ 48981403 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1348602
TGAGTAGACCACAGGGTTCTACAGACGGGTTTAGAGAGTAGTGGAGCGTGAGTAGACCACAGGGTTCTACAGACGGGTTTAGAGAGGGGTTCAGACAGACACTTGTGACTGTGTGAGGTTGTGTATTGTGGGGGCCACGTTTTTAGAGGTGGTAGGAAAGTGTTCTGTTAAAATGTCTTAAATGTTAGCTGAATGATGTTAGGGTCATTTCATTTCAGACACGCCAAATCATTCAGTTTAGAAAACAACAGTGTGTAATAAGAAAGATAGCATACTGTCATTAGCCTTGAAATCGATGCTTAGGCTACCGCGTTAGAAGTGAAACGTGCTGTTAAAACTACGCTGAACAACTCAGGTAAGTGTGTGATATCATCTCCCTGTTGATGCTGGTGCTATCGTGCAGCGTGACCTCCAGGTGAACTGGGACACTGCACCAAACATAGAGGTGAGACAGTTTAATGGGCATTGTCAGGGGTAGCTATATTCATTCATGGCATTAGAATAAGCATATGGCTCAGACTGATATGACTCCCTCACACATTCTGCTCCTGAAACCTTTAGGGAATGTGCATATGGAATGAGGAGCAGAAGTTGATGCATAAACAACAGTTGCAGGACAGACTTTTGTATGAAAAGACATGTTTGTTTATGAAGATGAAATGAaacaaatatatctactgtatggtTCTACATTAAATATGGAGAGTAGAGTTGCATTCTCACCCTGGACAGGGGCCATGTATGTGTGGGGttatacagtagatatactgcTATTACAGCATTAAGGTGTGTGTAGTAGTGGGACGAGGGGTAGCAACATTAGTGTAGTGTAGGTTTGGGATGTTCCATACTATAGGGGTAGTGATCATTGGTTTACAGGTGGGGGGagatcagggcagggcagggggAGTCTGTGGGGCGGCTGCTCATGCTGtgtgtcaatcagtcagtcaggggtttggatgaggtgatgAGGGGTTAGTCAGGGGTTTGGACCACAGAGAGGGGTGATGGGGGGATAGTCAGGGGTTTGGACCACAGAGAGGGGTGATGGGGGGATAGTCAGGGGTTTGGACCAcagagaggggtgatgaggggtTAGTCAGGGGTTTGGACCAcagagaggggtgatgaggggATAGTCAGGGGTTTGGACCAcagagaggggtgatgaggggATAGTCAGGGGTTTGGACCACAGAGAGGGGTGATGGGGGGATAGTAGGGGTTTGGACCACAGAGAGGGGTGTTGGGGGGATAGTCAGGGGTTTGGACCAcagagaggggtgatgaggggATAGTCAGGGGTTTGGACCACAGAGAGGGGTGTTGGGGGGATAGTCAGGGGTCTGGACCACAGAGAGGGGTGTTGGGGGAATAGTCAGGGGTTTGGACCACAGAGAGGGGTGTTGGGGGATAGTCAGGGGGTTGGACCACAGAGAGGGGTGTTGGGGGGATAGTCAGGGGTTTGGACCACAGAGAGGGGTGTTGGGGGGATAGTCAGGGGTTTGGACCACAGAGAGGGGTGTTGGGGGGATAGTCAGGGGTTTGGACCACAGAGAGGGGTGTTGGGGGGATAGTCAGGGGTTTGGACCACAGAGAGGGGTGTTGGGGGGATAGTCAGGGGTACAGTAAGCTAGTAGTTACCCAACCATCTGGATCTTATCCTGGCTCTGGACTAGAGGAGATAATAAGCCGTGTGTATTGAGGACAGGAGTAATGTCCCAGCAGACTGGCTTGTAAGGGAGAGTGACATGTGGGAGTCTATTGGAATGAGCTGGAATCTGACCTAGGATCAGATAGGAAATACTAAGAGGCTCCCGCTTGCCTCTCATATTATCTGCTCCCATAAATCATCATCATGGGCGAAGTGAGCATGCTCAGTAGAGACCGCAGCAGCATCTACAGTAGTCTCCCTCAGAGTGACACCCACCCCTGCAGTGTTACCCTGGCAACAACACACTCAGCCAGTGTAGGTGTGTTTGTGGAGACGTGGGACTGGTCTGGGGGTGCTAGGGTTATAGGGCTGGGGGGTGCAGGGGTAAAAGGGGGCGCAGTGAAAAGGATCAGGGGTGGGTGGGGTCATTGTTTGAGGGGTTACCTGTAGTGGGGGTGCTGGAAGTGACAGTGTGGAACCTCTGAAAGAACAGTGAAATGCATTGAGACTCTCATCCATGTTGGTACCCTAACAATGCTGTCACCATTAAGGTTCTGACACCTTTCCCTGGACACTcagacagtacatgacagtgtcACTTCTCTGCCTCTCTTACTTCCCCCCCTGTTCTTCCCTCTGTCCATCACAGCCCACCTCTCTGTGACTTTGTATCCCCTGTTCTTCCCTCTGTCCATCACAGCCCACCTCTCTGTGACTTTGTATCCCCTGTTCTTCCCTCTGTCCATCACAGCCCACCTCTCTGTGACTTTGTATCCCCTGTTCTTCCCTCTGTCCATCACAGCCCACCTCTCTGTGACTTTGTATCCCCTGTTCTTCCCTCTGTCCATCACAGCCCACCTCTCTGTGACTTTGTATCCCCTGTTCTTCCCTCTGTCCATCACAGCCCACCTCTCTGTGACTTTGTATCCCCTGTTCTTCCCTCTGTCCATCACAGCCCACCTCTCTGTGACTTTGTATCCCCTGTTCTTCCCTCTGTCCATCACAGCCCACCTCTCTGTGACTTTGTATCCCCTGTTCTTCCCTCTGTCCATCACAGCCCACCTCTCTGTGACTTTGTATCCCCTTTCCTTTCCcaatgggcacacactggttgaaacaacgcttttcccacatcatttcaatgataTTACggtgaaccaacgtggaatagacgtctGTGGGTTCTTTCTTTTTTAGGCCTCTCTCGCTTTTTTCACTTCATGCATCTTAagctctacccatccctcctgtCTTTCACCTTCTCTTCTCATCATTTCTCTATCTCCAGACGTACATCTCCCTCTGCTATACATTCCTTTGTATTCCTTCTAGATGCTCTTTCCCTCTCCGTATGTtcctggtctccctcctcctctgtcctcgtCTTTCCTGTCTCTACCCAGAACCCAACCCGCATCCCCCATGTCTTACCCATCTCCTCCAGTTCTGAGGTCATGGATTTGGAGCGGAGAGCGATGGCCGGAGTGCTTAGTCTTTTACTCTGCTGGGGGACTGTGGAGAAAGGAAAGCATTATCATCCTcgtcctcatcctcatcctcatcctcctcacatCATCGTTGTCGTAGTTCCAGACCCTGTGTTGTCTCTTACTTTTCTTTCTCTGGCCATCCTCCATGTCAGGGTTGCGTGTCACCATGACAACCTTGACCATGAGGGCGTTTCCACCTTGCCTGATCATGTTGACCACCTGCCTGTGTCCCACCTTCACCACATTCTGACCATTCa

Function

NR:

description
PREDICTED: SH3 and multiple ankyrin repeat domains protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1348602 True 3404 TUCP 0.51 1 48978000 48981403

Neighbor

gene id symbol gene type direction distance location
LOC110486658 NA coding upstream 18798 48957777 ~ 48959202 (+)
LOC118938635 NA coding upstream 19235 48958678 ~ 48958765 (+)
LOC118938636 NA coding upstream 19490 48958422 ~ 48958510 (+)
LOC118938637 NA coding upstream 19724 48958189 ~ 48958276 (+)
LOC110486653 LOC106601538 coding upstream 181972 48748015 ~ 48796028 (+)
LOC110486662 LOC106606881 coding downstream 118604 49100007 ~ 49104036 (+)
LOC118936277 prf1 coding downstream 153548 49134951 ~ 49138251 (+)
LOC110486671 LOC100335037 coding downstream 217443 49198846 ~ 49202693 (+)
LOC110486670 LOC106606891 coding downstream 229062 49210465 ~ 49213419 (+)
LOC110486678 NA coding downstream 282126 49263529 ~ 49266771 (+)
G1182554 NA non-coding upstream 100 48977516 ~ 48977900 (+)
G1182550 LOC106594513 non-coding upstream 4929 48971874 ~ 48973071 (+)
G1182547 NA non-coding upstream 18798 48957795 ~ 48959202 (+)
G1182542 LOC106595301 non-coding upstream 21441 48949888 ~ 48956559 (+)
G1182540 NA non-coding upstream 33033 48944407 ~ 48944967 (+)
G1182556 NA non-coding downstream 151 48981554 ~ 48982061 (+)
G1182557 NA non-coding downstream 3771 48985174 ~ 48985475 (+)
G1182560 NA non-coding downstream 8266 48989669 ~ 48989912 (+)
G1182562 NA non-coding downstream 13030 48994433 ~ 48994681 (+)
G1182578 NA non-coding downstream 40347 49021750 ~ 49021956 (+)
G1182541 NA other upstream 30031 48946749 ~ 48947969 (+)
G1182354 LOC106601550 other upstream 416376 48556014 ~ 48561624 (+)
G1182153 NA other upstream 855425 48119613 ~ 48122575 (+)
G1181955 NA other upstream 1234936 47742361 ~ 47743064 (+)
G1181636 NA other upstream 1428452 47549279 ~ 47549548 (+)
G1182595 NA other downstream 82382 49063785 ~ 49065142 (+)
G1182629 NA other downstream 133572 49114975 ~ 49118697 (+)
LOC110486677 LOC106601591 other downstream 300256 49281106 ~ 49284116 (+)

Expression


Co-expression Network