G1182582


Basic Information

Item Value
gene id G1182582
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49027959 ~ 49028241 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1348629
gctgtacatagtctattggtaaatagcccacccattttcacctacctcatccccatactgtttttatttatttacttttctgctcttttgcacaccaatatctttacctgtacatgaccatctgatcatttatcactccagtgttaatctgcaaaattgtaattgttcgcctacctcctcatgccttttgcacacattgtatatagactccccctttgttttctactgtgttattgacttgttaattgtttactccatgtgtaactctgtgttgtctgctcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1348629 True 283 lncRNA 0.38 1 49027959 49028241

Neighbor

gene id symbol gene type direction distance location
LOC110486658 NA coding upstream 68757 48957777 ~ 48959202 (+)
LOC118938635 NA coding upstream 69194 48958678 ~ 48958765 (+)
LOC118938636 NA coding upstream 69449 48958422 ~ 48958510 (+)
LOC118938637 NA coding upstream 69683 48958189 ~ 48958276 (+)
LOC110486653 LOC106601538 coding upstream 231931 48748015 ~ 48796028 (+)
LOC110486662 LOC106606881 coding downstream 71766 49100007 ~ 49104036 (+)
LOC118936277 prf1 coding downstream 106710 49134951 ~ 49138251 (+)
LOC110486671 LOC100335037 coding downstream 170605 49198846 ~ 49202693 (+)
LOC110486670 LOC106606891 coding downstream 182224 49210465 ~ 49213419 (+)
LOC110486678 NA coding downstream 235288 49263529 ~ 49266771 (+)
G1182581 NA non-coding upstream 776 49026836 ~ 49027183 (+)
G1182580 NA non-coding upstream 1858 49025890 ~ 49026101 (+)
G1182578 NA non-coding upstream 6003 49021750 ~ 49021956 (+)
G1182562 NA non-coding upstream 33278 48994433 ~ 48994681 (+)
G1182560 NA non-coding upstream 38047 48989669 ~ 48989912 (+)
G1182583 NA non-coding downstream 574 49028815 ~ 49029085 (+)
G1182584 NA non-coding downstream 1524 49029765 ~ 49032221 (+)
G1182585 NA non-coding downstream 4867 49033108 ~ 49033385 (+)
G1182587 NA non-coding downstream 16241 49044482 ~ 49044777 (+)
G1182588 NA non-coding downstream 16835 49045076 ~ 49046685 (+)
G1182555 NA other upstream 46556 48978000 ~ 48981403 (+)
G1182541 NA other upstream 79990 48946749 ~ 48947969 (+)
G1182354 LOC106601550 other upstream 466335 48556014 ~ 48561624 (+)
G1182153 NA other upstream 905384 48119613 ~ 48122575 (+)
G1181955 NA other upstream 1284895 47742361 ~ 47743064 (+)
G1182595 NA other downstream 35544 49063785 ~ 49065142 (+)
G1182629 NA other downstream 86734 49114975 ~ 49118697 (+)
LOC110486677 LOC106601591 other downstream 253418 49281106 ~ 49284116 (+)

Expression


Co-expression Network