Gene
RNA
| Item | Value |
|---|---|
| gene id | G1183470 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 49027962 ~ 49028166 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1349677 | True | 205 | lncRNA | 0.37 | 1 | 49027962 | 49028166 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486657 | LOC106595301 | coding | downstream | 71392 | 48946728 ~ 48956570 (-) |
| LOC110486656 | syt3 | coding | downstream | 91480 | 48875671 ~ 48936482 (-) |
| LOC110486655 | LOC106601541 | coding | downstream | 155115 | 48858248 ~ 48872847 (-) |
| LOC110486654 | LOC106606919 | coding | downstream | 196086 | 48824468 ~ 48831876 (-) |
| LOC110486652 | LOC106606918 | coding | downstream | 288891 | 48731139 ~ 48739071 (-) |
| LOC110486659 | LOC106601577 | coding | upstream | 37165 | 49065331 ~ 49078168 (-) |
| LOC110487553 | NA | coding | upstream | 50959 | 49079125 ~ 49081022 (-) |
| LOC110486660 | LOC103034594 | coding | upstream | 53267 | 49081433 ~ 49096321 (-) |
| LOC110486661 | LOC106606886 | coding | upstream | 75936 | 49104102 ~ 49113258 (-) |
| LOC110486665 | LOC106601588 | coding | upstream | 86792 | 49114958 ~ 49130957 (-) |
| G1183469 | NA | non-coding | downstream | 60 | 49027596 ~ 49027902 (-) |
| G1183468 | NA | non-coding | downstream | 3177 | 49024561 ~ 49024785 (-) |
| G1183463 | NA | non-coding | downstream | 9371 | 49018334 ~ 49018591 (-) |
| G1183444 | NA | non-coding | downstream | 50097 | 48977533 ~ 48977865 (-) |
| LOC110485205 | LOC106597701 | non-coding | downstream | 64568 | 48959315 ~ 49053966 (-) |
| G1183473 | NA | non-coding | upstream | 16345 | 49044511 ~ 49044773 (-) |
| G1183493 | NA | non-coding | upstream | 71570 | 49099736 ~ 49101884 (-) |
| G1183515 | NA | non-coding | upstream | 115089 | 49143255 ~ 49144184 (-) |
| G1183512 | NA | non-coding | upstream | 140520 | 49168686 ~ 49169344 (-) |
| G1183337 | NA | other | downstream | 359880 | 48667788 ~ 48668082 (-) |
| G1183225 | NA | other | downstream | 556979 | 48435826 ~ 48470983 (-) |
| G1183196 | NA | other | downstream | 638244 | 48379267 ~ 48389718 (-) |
| setd1a | LOC106585476 | other | upstream | 328212 | 49346540 ~ 49361234 (-) |
| LOC110486687 | LOC106601611 | other | upstream | 458760 | 49486817 ~ 49504819 (-) |
| LOC118938314 | NA | other | upstream | 509033 | 49537199 ~ 49544276 (-) |
| G1183706 | NA | other | upstream | 657172 | 49685338 ~ 49688456 (-) |
| LOC110486698 | LOC106601594 | other | upstream | 807497 | 49831067 ~ 49853671 (-) |
