G1182587


Basic Information

Item Value
gene id G1182587
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49044482 ~ 49044777 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1348634
gtcaggaacactgacacacagtcagcagggagcagcaccgacactgggctctacgtcagcaacactgacacacagtcagcagggagcagcaccgacactgggctctacgtcaggaacactgacacacagtcagcagggagcagcaccgacactgggctctacgtcaggaacactgacacacagtcagcagggagcagcaccgacactgggctctacgtcaggaacactgacacacagtcagcagggagcagcaccgacactgggctctacgtcaggaacactgacacacagtcagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1348634 True 296 lncRNA 0.59 1 49044482 49044777

Neighbor

gene id symbol gene type direction distance location
LOC110486658 NA coding upstream 85280 48957777 ~ 48959202 (+)
LOC118938635 NA coding upstream 85717 48958678 ~ 48958765 (+)
LOC118938636 NA coding upstream 85972 48958422 ~ 48958510 (+)
LOC118938637 NA coding upstream 86206 48958189 ~ 48958276 (+)
LOC110486653 LOC106601538 coding upstream 248454 48748015 ~ 48796028 (+)
LOC110486662 LOC106606881 coding downstream 55230 49100007 ~ 49104036 (+)
LOC118936277 prf1 coding downstream 90174 49134951 ~ 49138251 (+)
LOC110486671 LOC100335037 coding downstream 154069 49198846 ~ 49202693 (+)
LOC110486670 LOC106606891 coding downstream 165688 49210465 ~ 49213419 (+)
LOC110486678 NA coding downstream 218752 49263529 ~ 49266771 (+)
G1182585 NA non-coding upstream 11097 49033108 ~ 49033385 (+)
G1182584 NA non-coding upstream 12261 49029765 ~ 49032221 (+)
G1182583 NA non-coding upstream 15397 49028815 ~ 49029085 (+)
G1182582 NA non-coding upstream 16241 49027959 ~ 49028241 (+)
G1182581 NA non-coding upstream 17299 49026836 ~ 49027183 (+)
G1182588 NA non-coding downstream 299 49045076 ~ 49046685 (+)
G1182591 NA non-coding downstream 8819 49053596 ~ 49054017 (+)
G1182627 NA non-coding downstream 59325 49104102 ~ 49149924 (+)
G1182611 NA non-coding downstream 255424 49300201 ~ 49303631 (+)
G1182700 LOC106606901 non-coding downstream 265323 49310100 ~ 49311267 (+)
G1182555 NA other upstream 63079 48978000 ~ 48981403 (+)
G1182541 NA other upstream 96513 48946749 ~ 48947969 (+)
G1182354 LOC106601550 other upstream 482858 48556014 ~ 48561624 (+)
G1182153 NA other upstream 921907 48119613 ~ 48122575 (+)
G1181955 NA other upstream 1301418 47742361 ~ 47743064 (+)
G1182595 NA other downstream 19008 49063785 ~ 49065142 (+)
G1182629 NA other downstream 70198 49114975 ~ 49118697 (+)
LOC110486677 LOC106601591 other downstream 236882 49281106 ~ 49284116 (+)

Expression


Co-expression Network