G1182588


Basic Information

Item Value
gene id G1182588
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49045076 ~ 49046685 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1348635
GTCaggaacactgacacacagtcagcagggagcagcaccgacactgggctctacgtcagcaacactgacacacagtcagcagggagcaACACCGACACTGGGCTCTACGTCaggaacactgacacacagtcagcagggagcagcaccgacactgggctctacgtcagcaacactgacacacagtcagcagggagcagcaccaacactgggctctacgtcaggaacactgacacacagtcagcagggagcagcaccaacactgggctctacgtcaggaacactgacacacagtcagcagggagcagcaccgacactgggctctac

Function

NR:

description
PREDICTED: DNA topoisomerase 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1348635 True 324 lncRNA 0.58 2 49045076 49046685

Neighbor

gene id symbol gene type direction distance location
LOC110486658 NA coding upstream 85874 48957777 ~ 48959202 (+)
LOC118938635 NA coding upstream 86311 48958678 ~ 48958765 (+)
LOC118938636 NA coding upstream 86566 48958422 ~ 48958510 (+)
LOC118938637 NA coding upstream 86800 48958189 ~ 48958276 (+)
LOC110486653 LOC106601538 coding upstream 249048 48748015 ~ 48796028 (+)
LOC110486662 LOC106606881 coding downstream 53322 49100007 ~ 49104036 (+)
LOC118936277 prf1 coding downstream 88266 49134951 ~ 49138251 (+)
LOC110486671 LOC100335037 coding downstream 152161 49198846 ~ 49202693 (+)
LOC110486670 LOC106606891 coding downstream 163780 49210465 ~ 49213419 (+)
LOC110486678 NA coding downstream 216844 49263529 ~ 49266771 (+)
G1182587 NA non-coding upstream 299 49044482 ~ 49044777 (+)
G1182585 NA non-coding upstream 11691 49033108 ~ 49033385 (+)
G1182584 NA non-coding upstream 12855 49029765 ~ 49032221 (+)
G1182583 NA non-coding upstream 15991 49028815 ~ 49029085 (+)
G1182582 NA non-coding upstream 16835 49027959 ~ 49028241 (+)
G1182591 NA non-coding downstream 6911 49053596 ~ 49054017 (+)
G1182627 NA non-coding downstream 57417 49104102 ~ 49149924 (+)
G1182611 NA non-coding downstream 253516 49300201 ~ 49303631 (+)
G1182700 LOC106606901 non-coding downstream 263415 49310100 ~ 49311267 (+)
G1182705 NA non-coding downstream 273118 49319803 ~ 49320131 (+)
G1182555 NA other upstream 63673 48978000 ~ 48981403 (+)
G1182541 NA other upstream 97107 48946749 ~ 48947969 (+)
G1182354 LOC106601550 other upstream 483452 48556014 ~ 48561624 (+)
G1182153 NA other upstream 922501 48119613 ~ 48122575 (+)
G1181955 NA other upstream 1302012 47742361 ~ 47743064 (+)
G1182595 NA other downstream 17100 49063785 ~ 49065142 (+)
G1182629 NA other downstream 68290 49114975 ~ 49118697 (+)
LOC110486677 LOC106601591 other downstream 234974 49281106 ~ 49284116 (+)

Expression


Co-expression Network