G1182591


Basic Information

Item Value
gene id G1182591
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49053596 ~ 49054017 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1348638
ctcggaTGCAGAAAAAGCGCTTCACTTACTGTTCTTCTTCAGTTGCACTTGATTCACAGATCCCTCCTTTGGAAATGGAGAGAGTGACAGAAGTggtggagtgagggaggggggatccacacacagaaataaggagagaggaggcagcgcaaaataaaaattaaaaaaggaATGGGAGAAGTGGAAAAATCACCGCTGATAGTGAGGCCTTTGAAAATCACATTTTACGTGGTGTCCGGTGTCCTTGTGTGCTGTGGGGCGATGCATATTCTCCATGTCGGTCTTCTAGCGCCAGGCAGCACAACCCAGTAGTAACACTTCTATTTCCTCAGTCCTGAaaatgtccctctccctctctctcttcccctctggcACGTTCAAACAgcccaatctctctctcactttcatcTGGTTGGTTTAtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1348638 True 422 lncRNA 0.47 1 49053596 49054017

Neighbor

gene id symbol gene type direction distance location
LOC110486658 NA coding upstream 94394 48957777 ~ 48959202 (+)
LOC118938635 NA coding upstream 94831 48958678 ~ 48958765 (+)
LOC118938636 NA coding upstream 95086 48958422 ~ 48958510 (+)
LOC118938637 NA coding upstream 95320 48958189 ~ 48958276 (+)
LOC110486653 LOC106601538 coding upstream 257568 48748015 ~ 48796028 (+)
LOC110486662 LOC106606881 coding downstream 45990 49100007 ~ 49104036 (+)
LOC118936277 prf1 coding downstream 80934 49134951 ~ 49138251 (+)
LOC110486671 LOC100335037 coding downstream 144829 49198846 ~ 49202693 (+)
LOC110486670 LOC106606891 coding downstream 156448 49210465 ~ 49213419 (+)
LOC110486678 NA coding downstream 209512 49263529 ~ 49266771 (+)
G1182588 NA non-coding upstream 6911 49045076 ~ 49046685 (+)
G1182587 NA non-coding upstream 8819 49044482 ~ 49044777 (+)
G1182585 NA non-coding upstream 20211 49033108 ~ 49033385 (+)
G1182584 NA non-coding upstream 21375 49029765 ~ 49032221 (+)
G1182583 NA non-coding upstream 24511 49028815 ~ 49029085 (+)
G1182627 NA non-coding downstream 50085 49104102 ~ 49149924 (+)
G1182611 NA non-coding downstream 246184 49300201 ~ 49303631 (+)
G1182700 LOC106606901 non-coding downstream 256083 49310100 ~ 49311267 (+)
G1182705 NA non-coding downstream 265786 49319803 ~ 49320131 (+)
G1182707 NA non-coding downstream 269921 49323938 ~ 49324173 (+)
G1182555 NA other upstream 72193 48978000 ~ 48981403 (+)
G1182541 NA other upstream 105627 48946749 ~ 48947969 (+)
G1182354 LOC106601550 other upstream 491972 48556014 ~ 48561624 (+)
G1182153 NA other upstream 931021 48119613 ~ 48122575 (+)
G1181955 NA other upstream 1310532 47742361 ~ 47743064 (+)
G1182595 NA other downstream 9768 49063785 ~ 49065142 (+)
G1182629 NA other downstream 60958 49114975 ~ 49118697 (+)
LOC110486677 LOC106601591 other downstream 227642 49281106 ~ 49284116 (+)

Expression


Co-expression Network