G1182629


Basic Information

Item Value
gene id G1182629
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49114975 ~ 49118697 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1348688
CAGTTTATTGCACAATCGTTGCTGGAGACTGAGGAGTGGGAGGGCCTGTCTGTATAATGCAAGACACTACAGATGGACACGTAGAGAAACTAGACACAGATACAAGATGGCCATAAATTAACAGAAGCGTTGGTGAGAAGAACACAGGCGGGTCGATGAGGCACAGTAGGATGCAACTTGCACCCAGACATGGAGCAGGACAGacaaaacacattaaaacacagatTTCACACATGAAGTATGAGATCTTAAAACAGCTCATATATTCAAACATACAGGGTCCATAATATACATTCATAACTGGTTTGTGCAACCCTGAACATGCAGGGTTTGGTCACTCCTAGCATGTTAACACTGTTGAGTAGTAAGTATGTCAGTCCGTCACATTGCCTGTGTAAAAACAACCTGTCTAACTCTGGTATTTGTTTTCCACCAATGGTCTTTTGACTAATCACATCAggtcttttcacatcagatatttttcagagttgattggtcaaaagatcaattAGTGAAAATATCAGAACTGGGCTTCCTCTGCCAGACACAGAACGGTTGGTGGTGAGCCTTTATACGATACAATATGATGCCTGCAATAGACTGCAATGTTACAGAGTAATGTCCACCAGATGGGGCTAAATAAACAGCCATTCAATTCATTTACAAAAACCAAGAGAGACCGAAGACAAGgacaaacagagaaacagacagaccctCAAGAAAGCTCCCTTCGTCAAGAGGAAAAGGGCATTTCATTATCAGTACAGACAGTATCATAATTAGTACCAACCCTCCACAGAGTAATTGTATCAATAATAATaagtatcatcatcatcatcgtatAACAATAGTGGACAGTTAATCCTTTATAAATAGTCAGAAACAGGCTAGCTGGCACctgtgtacaaaaaaaaaaacgtttgttAGTGTTTTCATACATCATGTCATCATTATAATCATAGAATAGCAGAATATACAGACTAAAACAATGACCGTTTGCTGGCCTGGTTCCATCTCTGAAAAATGGTACTGTTGGTGGGCCTGGTTCCATATCTGAAAAATGGTACTGTTGGTGGGCCTGGTTCCATCTCTGGAAAATGGTTTTCAGTTCTTTCTCCCAccactcttccctcccctcccatcttccCGTTTCCACAGTCTTACTCTTTTCTCAACCGCTCTTTAAATACATTTCATCTCGTTTTATCAGATCCCACCCCAAGAATccctacttctactactactgctgactCTTACCTTCCCTCACAGTGGCCTCTGTGGTGTGTGGCTCTAAAAGCCATGTTTCAGAGAGGAACCCCCTGGCCTCAACGTAACAGCTACGGCTATAGCACCCTGAGAAGTGGAAAACCCAGGGTGGTGGAGTCCCTTTGAGTAGAGAACTGACCCTTTTTGTTTTTGTGACAGTTGAGAAACACCACTTGAACACACATCCACTTCAGACAGTGTAAATGTATTTGTATCTGATAATGCATAGATATCCAGTTGTAATCAGAGGTATTCatacatgcccccccccccctgaatctTCCCCATCTTTTATTTTTATGAGGTACATTTAGTCGAGCAAAAGCATTCTTAAACCCTGGGTCTCTCAAAAACCCACACGGTTACCCATCTCTACAACAGAACTGAAAAGAATCCGTTTTATCTGGGTTCACATATTTGAGTAAATAGGTTGGATGTGGTTGATATTAAATACACAGTAGTACCACCCCTCAGGTCCCTTTTCCCTCGGACACAGAGCATTGTCTGAGGTGACATACAGATTGAATTCCAGGTTCTGCTTTCTTTCCTTTAATTACATGTATAAAAGTATCAGCGTTATATACTGtttgcactgtatgtatatataatctacatacatacatgtatttACATGGACTTTAAATAAGTTTCATTACTGGTATTCACTTTGATCCAAAGCCcttttgaaaataaataaacagtgcAGTTTATTTGATATAGTTGTATTGCCTCTGTTCTAGTCCCTCATATTCCTGTattagtatatactgtatgtagtatgtTCCTCTCTTAACACTCATGGTCCACTGCCCTGACAGCATGTAAAAGCTCTTAGCTGGAGTGACTGACACATGACGTGTCATATGTTACAATGCACAAGCATTTGGCTAATACTAAGTTAAAGTCCTCGTATGAGACAATGACTTTCCGTTTGAGAGCTACTAACATGCATTAATAATCAGTTTCATTCAGTGCGCTGTAATACAATTTCAGCTTATGACGTTACAAGGGGCCATGGCTGTAATGTACTCACCATGACAGGGGTGGTTTCATACGGGGGCTGAGAAACGGTTTAACACTAGTCAGGGTCGGGTTGCAGTCTGAGGCCTGTGTGGGAGAGGCTGGGACATTCTCCCTCACCCTTGACTCAATGTGAGCAAAGTATGTGCTACAACGGAGGCCCTCGACACATCATTTGGCAACTCGTGAGTGAAGTGGTTATTAGAGTgggcatgtgtgagtgtgtgcaccaGGTTACAAAAGTGCAATGTTACATAGAAACATGCAAACTTAACTAGTCCATGGGCCGACTAGGTTAAAGGTCCCTCAGAACAAAGCAGATTAATAAAACAAACCGCTTGGTCTCAACCTTCCACATACAGTCAATCGTTGAACAAAATCTATAAAACACAAAAGTAATCCAAAAAGTAAACATTGTACTGTTCCTCAGAGCATAAACTCAAATGCCAGTGCAGAAACTAGTGGCAACAGTTTTGACTTTAAAACTGAGTAACCAGAAATAGTTTGCTCAGGGTTACTGGTTGTGAAAATGGTGAGAGGGTTAGGGGTTCATTCATGCTTGGTTGCAGTTGTCTAACGAAATACTATACGGCACAGGTCAGCTTGGTACTACATTATTGTACCTCTCTAAGGGTAACAAAGTGCAAAGAGTCAAACTGGGCTATGTTATGTAGTAATAATGTCCAGCTTTGGCATAGAATGCAGTGCCTCATACCAAATCATTATCTGGCCTCGGACAGTTAAAAGCCTAGAAAGTAGCCTAGCTGTCGGCCATTTCCACGAGATTAAGGTCAACCAATAATAAAGAGTAACTTAATGCAACTCAACAATAGCAATTGTAAACGTGGATAATCTGTCATGATTCCCTATTCAAAATGGTTGTATTTTCAATGGCACAATGCATCAAACAAAATGAGCACTAACAAGCCAAGGAATGAACCCCTTCACCCATACCCAGTTACCCTTCACCCATACCCAGTTACCCTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1348688 True 3275 TUCP 0.41 3 49114975 49118697

Neighbor

gene id symbol gene type direction distance location
LOC110486662 LOC106606881 coding upstream 10939 49100007 ~ 49104036 (+)
LOC110486658 NA coding upstream 155773 48957777 ~ 48959202 (+)
LOC118938635 NA coding upstream 156210 48958678 ~ 48958765 (+)
LOC118938636 NA coding upstream 156465 48958422 ~ 48958510 (+)
LOC118938637 NA coding upstream 156699 48958189 ~ 48958276 (+)
LOC118936277 prf1 coding downstream 16254 49134951 ~ 49138251 (+)
LOC110486671 LOC100335037 coding downstream 80149 49198846 ~ 49202693 (+)
LOC110486670 LOC106606891 coding downstream 91768 49210465 ~ 49213419 (+)
LOC110486678 NA coding downstream 144832 49263529 ~ 49266771 (+)
LOC110486677 LOC106601591 coding downstream 162409 49281106 ~ 49284116 (+)
G1182591 NA non-coding upstream 60958 49053596 ~ 49054017 (+)
G1182588 NA non-coding upstream 68290 49045076 ~ 49046685 (+)
G1182587 NA non-coding upstream 70198 49044482 ~ 49044777 (+)
G1182585 NA non-coding upstream 81590 49033108 ~ 49033385 (+)
G1182584 NA non-coding upstream 82754 49029765 ~ 49032221 (+)
G1182611 NA non-coding downstream 181504 49300201 ~ 49303631 (+)
G1182700 LOC106606901 non-coding downstream 191403 49310100 ~ 49311267 (+)
G1182705 NA non-coding downstream 201106 49319803 ~ 49320131 (+)
G1182707 NA non-coding downstream 205241 49323938 ~ 49324173 (+)
G1182711 LOC106585476 non-coding downstream 231698 49350395 ~ 49352361 (+)
G1182595 NA other upstream 49833 49063785 ~ 49065142 (+)
G1182555 NA other upstream 133572 48978000 ~ 48981403 (+)
G1182541 NA other upstream 167006 48946749 ~ 48947969 (+)
G1182354 LOC106601550 other upstream 553351 48556014 ~ 48561624 (+)
G1182153 NA other upstream 992400 48119613 ~ 48122575 (+)
G1182742 NA other downstream 300873 49419570 ~ 49426223 (+)
ndua4 ndua4 other downstream 461629 49580324 ~ 49584562 (+)

Expression


Co-expression Network