Gene
RNA
| Item | Value |
|---|---|
| gene id | G1183515 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 49143255 ~ 49144184 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1349746 | True | 254 | lncRNA | 0.44 | 2 | 49143255 | 49144184 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486665 | LOC106601588 | coding | downstream | 12298 | 49114958 ~ 49130957 (-) |
| LOC110486661 | LOC106606886 | coding | downstream | 29997 | 49104102 ~ 49113258 (-) |
| LOC110486660 | LOC103034594 | coding | downstream | 46934 | 49081433 ~ 49096321 (-) |
| LOC110487553 | NA | coding | downstream | 62233 | 49079125 ~ 49081022 (-) |
| LOC110486659 | LOC106601577 | coding | downstream | 65087 | 49065331 ~ 49078168 (-) |
| LOC110486668 | armc5 | coding | upstream | 58862 | 49203046 ~ 49209637 (-) |
| LOC110486673 | elob | coding | upstream | 71574 | 49215758 ~ 49219547 (-) |
| LOC110486672 | LOC106606893 | coding | upstream | 76864 | 49221048 ~ 49225262 (-) |
| rusf1 | cssa06h16orf58 | coding | upstream | 107443 | 49251627 ~ 49263335 (-) |
| prr14 | LOC106601590 | coding | upstream | 123424 | 49267608 ~ 49277799 (-) |
| G1183493 | NA | non-coding | downstream | 41371 | 49099736 ~ 49101884 (-) |
| G1183473 | NA | non-coding | downstream | 98482 | 49044511 ~ 49044773 (-) |
| G1183470 | NA | non-coding | downstream | 115089 | 49027962 ~ 49028166 (-) |
| G1183469 | NA | non-coding | downstream | 115353 | 49027596 ~ 49027902 (-) |
| G1183512 | NA | non-coding | upstream | 24502 | 49168686 ~ 49169344 (-) |
| G1183273 | NA | non-coding | upstream | 150992 | 49295176 ~ 49299864 (-) |
| G1183567 | NA | non-coding | upstream | 173098 | 49317282 ~ 49317483 (-) |
| G1183297 | NA | non-coding | upstream | 180843 | 49325027 ~ 49325527 (-) |
| G1183588 | NA | non-coding | upstream | 288753 | 49432937 ~ 49433171 (-) |
| LOC110485205 | LOC106597701 | other | downstream | 165847 | 48959315 ~ 49053966 (-) |
| LOC110486656 | syt3 | other | downstream | 206798 | 48875671 ~ 48936482 (-) |
| G1183337 | NA | other | downstream | 475173 | 48667788 ~ 48668082 (-) |
| G1183225 | NA | other | downstream | 672272 | 48435826 ~ 48470983 (-) |
| G1183196 | NA | other | downstream | 753537 | 48379267 ~ 48389718 (-) |
| setd1a | LOC106585476 | other | upstream | 212194 | 49346540 ~ 49361234 (-) |
| LOC110486687 | LOC106601611 | other | upstream | 342742 | 49486817 ~ 49504819 (-) |
| LOC118938314 | NA | other | upstream | 393015 | 49537199 ~ 49544276 (-) |
| G1183706 | NA | other | upstream | 541154 | 49685338 ~ 49688456 (-) |
| LOC110486698 | LOC106601594 | other | upstream | 691479 | 49831067 ~ 49853671 (-) |
