G1183297


Basic Information

Item Value
gene id G1183297
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49325027 ~ 49325527 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1349461
caggaggaaagcatggccagccatagagaaatgcttattgaaattttcgatgatcgtggatttatcggtgttgACCGTGTTACTTAGCCTcggagcagtgggcagctgagaggaggtgctcttattctccatggactttacagtgtcccaaaactttttggagttagagctacaggatgcaaatttatatttgaaaaagctagcctttgctttcctgactgactgtgtgtattggttcctgacttccctgaacagttgcatattgcggggactattcgatgctattgcagtccgccacaggatgtttttgtgctgttaTCTTTCTTTGCTGCAGATGACcgtataactggacagtactctaagtgtgataggaccagggattgaatcACCTGATTCAGTGTGCTAGATGTTACATACTCTGAACATTTTCTTGTAACAGCAATTCCCTTACCCATCTTAATAACAATATAATCTATGTGTTCTGACCATGATAAAGCTGCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1349461 True 501 lncRNA 0.43 1 49325027 49325527

Neighbor

gene id symbol gene type direction distance location
LOC110486679 LOC106601593 coding downstream 12038 49300153 ~ 49312989 (-)
cd2bp2 cd2b2 coding downstream 43917 49278149 ~ 49281110 (-)
prr14 LOC106601590 coding downstream 47228 49267608 ~ 49277799 (-)
rusf1 cssa06h16orf58 coding downstream 61692 49251627 ~ 49263335 (-)
LOC110486672 LOC106606893 coding downstream 99765 49221048 ~ 49225262 (-)
hsd3b7 hsd3b7 coding upstream 1195 49326722 ~ 49339857 (-)
setd1a LOC106585476 coding upstream 21013 49346540 ~ 49361234 (-)
LOC110486683 ccdc47 coding upstream 39891 49365418 ~ 49369859 (-)
kcnh2 kcnh2 coding upstream 62631 49388158 ~ 49429351 (-)
LOC100136168 LOC106585555 coding upstream 122715 49448242 ~ 49456279 (-)
G1183567 NA non-coding downstream 7544 49317282 ~ 49317483 (-)
G1183273 NA non-coding downstream 25163 49295176 ~ 49299864 (-)
G1183512 NA non-coding downstream 155683 49168686 ~ 49169344 (-)
G1183515 NA non-coding downstream 180843 49143255 ~ 49144184 (-)
G1183493 NA non-coding downstream 223143 49099736 ~ 49101884 (-)
G1183588 NA non-coding upstream 107410 49432937 ~ 49433171 (-)
G1183590 NA non-coding upstream 110241 49435768 ~ 49435981 (-)
G1183592 NA non-coding upstream 113624 49439151 ~ 49439353 (-)
G1183595 NA non-coding upstream 118837 49444364 ~ 49444722 (-)
G1183604 NA non-coding upstream 135965 49461492 ~ 49461846 (-)
LOC110485205 LOC106597701 other downstream 347619 48959315 ~ 49053966 (-)
LOC110486656 syt3 other downstream 388570 48875671 ~ 48936482 (-)
G1183337 NA other downstream 656945 48667788 ~ 48668082 (-)
G1183225 NA other downstream 854044 48435826 ~ 48470983 (-)
G1183196 NA other downstream 935309 48379267 ~ 48389718 (-)
LOC110486687 LOC106601611 other upstream 161399 49486817 ~ 49504819 (-)
LOC118938314 NA other upstream 211672 49537199 ~ 49544276 (-)
G1183706 NA other upstream 359811 49685338 ~ 49688456 (-)
LOC110486698 LOC106601594 other upstream 510136 49831067 ~ 49853671 (-)

Expression


Co-expression Network