G1182724


Basic Information

Item Value
gene id G1182724
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49364049 ~ 49365202 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1348796
accaggtttgcacacactgcagcagggattttggccgactgtcgctgggcaatacggactttcagctccctccaaagattttctattgggtttaggtctggagactggctaggccactccaggacattgagatgcttcttacggagccactccttagttgccctggctgtgtgtttcgggtcgttgtcatgctggaagacccagccacgacccatcttcaatgctcttactgagggaaggaggttgttggccaagatctcgcaatacatgaccccatccatcctcccctcaatacggtgcagtcgtcctgtcccctttgcagaaaagcatccccaaagaatgatgtttccacctccatgcttcatggttgagatggtgttcttggggttgtactcatccttcttcttcctccaaacacagcgagtggagtttagaccaaaaagctctatttttgcctcatcagaccacatgaccttctcccattcctcctctggatcattcggatggtcattggcaaacttcagacgggcctggacatgcgctggcttgagcaggggggaccttgcgtgtgctgcaggattttaatccatgacggcgtagtgtgttactaatggttttctttgagactgtggtcccagctctcttcaggtcattgatcaggtcctgccgtgtagttctgggctgatccctcaccttcctcatgatcattgatgcccaacgaggtgagatcttgcatggagccccagaccgagggtgattgaccgtcatcttgaacttctcccattttctaataattgctccaacagttgttgccttctcaccaagctgcttgcctattgtcctgtagcccatcccagccttgtgcaggtctacaattttatccctgatgtccttacacagctctctggtcttggccattgtggagaggttggagtctgtttgattgagtgtgtggacaggtgtcttttatacaggtaacgagttcaaacaggtgcagttaatacaggtaatgagtggagaacaggagggcttcttaaagaaaaactaacaggtctgtgagagcccgaattcttactggttggtaggtgatcaaatacttatatcatgcaataaaatgcaaattaattacttaaaaatcatacaatgtgattttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1348796 True 1154 lncRNA 0.48 1 49364049 49365202

Neighbor

gene id symbol gene type direction distance location
LOC100136718 mlc-2 coding upstream 64798 49295336 ~ 49299251 (+)
LOC110486677 LOC106601591 coding upstream 79933 49281106 ~ 49284116 (+)
LOC110486678 NA coding upstream 97282 49263529 ~ 49266771 (+)
LOC110486670 LOC106606891 coding upstream 150630 49210465 ~ 49213419 (+)
LOC110486671 LOC100335037 coding upstream 161356 49198846 ~ 49202693 (+)
LOC110486684 LOC106601519 coding downstream 5036 49370238 ~ 49384522 (+)
LOC110486690 LOC106606872 coding downstream 157328 49522530 ~ 49530733 (+)
LOC110486693 rundc3a coding downstream 167818 49533020 ~ 49551503 (+)
LOC110486691 LOC106601608 coding downstream 186520 49551722 ~ 49557177 (+)
LOC110486695 LOC106601598 coding downstream 193586 49558788 ~ 49567825 (+)
G1182711 LOC106585476 non-coding upstream 11688 49350395 ~ 49352361 (+)
G1182707 NA non-coding upstream 39876 49323938 ~ 49324173 (+)
G1182705 NA non-coding upstream 43918 49319803 ~ 49320131 (+)
G1182700 LOC106606901 non-coding upstream 52782 49310100 ~ 49311267 (+)
G1182611 NA non-coding upstream 60418 49300201 ~ 49303631 (+)
G1182725 NA non-coding downstream 21020 49386222 ~ 49388178 (+)
G1182750 NA non-coding downstream 73776 49438978 ~ 49439207 (+)
G1182753 NA non-coding downstream 76523 49441725 ~ 49441944 (+)
G1182757 NA non-coding downstream 81253 49446455 ~ 49446770 (+)
G1182761 NA non-coding downstream 83046 49448248 ~ 49448677 (+)
G1182629 NA other upstream 245352 49114975 ~ 49118697 (+)
G1182595 NA other upstream 298907 49063785 ~ 49065142 (+)
G1182742 NA other downstream 54368 49419570 ~ 49426223 (+)
ndua4 ndua4 other downstream 215124 49580324 ~ 49584562 (+)
G1183819 NA other downstream 467019 49832221 ~ 49835014 (+)
G1183875 NA other downstream 517619 49882821 ~ 49883435 (+)
G1184435 LOC106606845 other downstream 1620611 50985813 ~ 50986566 (+)

Expression


Co-expression Network