G1182725


Basic Information

Item Value
gene id G1182725
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49386222 ~ 49388178 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1348797
TTGTGCTTCAAGAAACCTTTACAGAACAAGAAAGGCTTAAAAAACAGAGTTACATTCTCCTGAAACTCAAAAACATCTTGAAACTGGGATTCTGGGAAAATGACACTATCCCAGTGACATCACTTGATTGGCAGATTCCATCCACATCACTTCCTCCCAGGTGGGCATCAAACATGAAAGGTGTTTATAATGCTTCACAAGTGCTACATAACCAGAGCATAAAAGAGATGAGAAAACTGTCTGCTTTTTTCCCATGTCAATTATCTGTTCTCATGACCCCTGACAATGTTGACTCAATAATGAGACATGTCACTTCATGTTAACAAATATTGCTTTCCATTAAGTCATATGATTGGTAGAACATGAGAGTAGAATTACTGTATTCAAAATGGCCACTTTTACAGTAGTCATTCCTACCATACAGACATAAACAGTATTTAGATGGCATTCATACCATCTCTTTATATCATCTGTTGATAATATGttacaccaacatagaaatagtgTGAAAGAAATACATGTGTGCGTTCATAACTATTAGGTTTCCAGATTGACGGTAAGATCCTCATGATACTATAAAAATACGTTTCAGTTCAACCTATAAACAGCACTGAGCCTGAATGTGCAGTTCCTCTACAgtgtaaacatacagtacacacagttaTATGTATTTTTGGCCAAATTCTTATCTCCCAACAAAAAGGACCATGGCATAAAAGGACCATCACTTAACAAAAGGCAAAGGAGAGAGGAATGACAATACTACAGCTTTGAGATCCAGGGAAAAGGGGGCTTGGGGTTATTGTTAGTGTCCGTGtgacgtgtgtgtacgtgtgcttcTAGTCAGCCCAGTTTCATATCAGATCTCCATAGGCAGTGCCAGGCCACCAGGCTTTGTGGGGTCTGGGTTGCAGAAATCCTAAACCCCTCTCAATAATGCCCTAGACCCtgatagagaggagaggttgtTTGTCACACAGGACCAGAGGTGCCCCAGCCCCGGGCACTGTGAGTCAGTGAGTGGGGGCCCTCCATAGAACCTCCTCTCAGCTATGTGGAAGGCAACCCACGTTGATCAGCAGCATGGTACAGGTTAGGGGGTTGGGtggggattggagaggaggaatgagagatTTGACGATTAGAGAAGTGACTCTGCCAACATATGATTGTCCTCCTGTGGTGGTGCAGGGGGTGCTAGGAGTGAGGGATGATCAGGTTtaaggttaaaggtcagaggGTTTTAGCTGCCTGGCAGGATGGGGTCAGAAATGTGCCTCTGAATCTCCTGCCCCTCTGTGGAGGTCTCCAGGttgtcagggagggaggggaaacgCAGGCTGCCACACAGCAGTCCAGAGGGCCCCAGGGTTTGGCAGGAGACATGGGGGAGGCTGAAGCCCATGGAGGACCCTGGAAGGGGCTCTGTCTCAGGGGACATGGACATGGTGTCATCAGAGGAGTCCTTGGACTTGT

Function

NR:

description
PREDICTED: potassium voltage-gated channel subfamily H member 7-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1348797 True 1476 lncRNA 0.46 2 49386222 49388178

Neighbor

gene id symbol gene type direction distance location
LOC110486684 LOC106601519 coding upstream 1700 49370238 ~ 49384522 (+)
LOC100136718 mlc-2 coding upstream 86971 49295336 ~ 49299251 (+)
LOC110486677 LOC106601591 coding upstream 102106 49281106 ~ 49284116 (+)
LOC110486678 NA coding upstream 119455 49263529 ~ 49266771 (+)
LOC110486670 LOC106606891 coding upstream 172803 49210465 ~ 49213419 (+)
LOC110486690 LOC106606872 coding downstream 134352 49522530 ~ 49530733 (+)
LOC110486693 rundc3a coding downstream 144842 49533020 ~ 49551503 (+)
LOC110486691 LOC106601608 coding downstream 163544 49551722 ~ 49557177 (+)
LOC110486695 LOC106601598 coding downstream 170610 49558788 ~ 49567825 (+)
LOC110486696 LOC106601597 coding downstream 183330 49571508 ~ 49577269 (+)
G1182724 NA non-coding upstream 21020 49364049 ~ 49365202 (+)
G1182711 LOC106585476 non-coding upstream 33861 49350395 ~ 49352361 (+)
G1182707 NA non-coding upstream 62049 49323938 ~ 49324173 (+)
G1182705 NA non-coding upstream 66091 49319803 ~ 49320131 (+)
G1182700 LOC106606901 non-coding upstream 74955 49310100 ~ 49311267 (+)
G1182750 NA non-coding downstream 50800 49438978 ~ 49439207 (+)
G1182753 NA non-coding downstream 53547 49441725 ~ 49441944 (+)
G1182757 NA non-coding downstream 58277 49446455 ~ 49446770 (+)
G1182761 NA non-coding downstream 60070 49448248 ~ 49448677 (+)
G1182760 NA non-coding downstream 60607 49448785 ~ 49449921 (+)
LOC110486671 LOC100335037 other upstream 183532 49198846 ~ 49202693 (+)
G1182629 NA other upstream 267525 49114975 ~ 49118697 (+)
G1182595 NA other upstream 321080 49063785 ~ 49065142 (+)
G1182742 NA other downstream 31392 49419570 ~ 49426223 (+)
ndua4 ndua4 other downstream 192148 49580324 ~ 49584562 (+)
G1183819 NA other downstream 444043 49832221 ~ 49835014 (+)
G1183875 NA other downstream 494643 49882821 ~ 49883435 (+)
G1184435 LOC106606845 other downstream 1597635 50985813 ~ 50986566 (+)

Expression


Co-expression Network