G1182742


Basic Information

Item Value
gene id G1182742
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49419570 ~ 49426223 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1348815
agTGCTATTGAGGACCATGTGTCTCACCTGTGTGACATGTGTGACCTTCTCTGTGACGTCTCGGTGGCGGTCCTTTACTTTGCTGGGAGCGATGATCTCGATCTCAGTGGGTGAGGGCGGTCGCAAGAGGTCGGAGGCGAAACTGAGTGTGAGGGGGTTACGAGTGCTGGTCCTGCGTCGCATCAGGTCCGAGTCTGAGGTGGAGCTCAGAGTACCGGCCTTCAGtcctcctggttttgaccttttgcctgccctgacactgagcccgcctgcctgaccattcagcctgccctgaccttgagcctgcctgactCCCTGTACCGTTTGGAACTCTGACCTGGTTCTGAACTTTTACCTGTCCTCGACCTGCCCTCTTGCCTGC
>TU1348816
agTGCTATTGAGGACCATGTGTCTCACCTGTGTGACATGTGTGACCTTCTCTGTGACGTCTCGGTGGCGGTCCTTTACTTTGCTGGGAGCGATGATCTCGATCTCAGTGGGTGAGGGCGGTCGCAAGAGGTCGGAGGCGAAACTGAGTGTGAGGGGGTTACGAGTGCTGGTCCTGCGTCGCATCAGGTCCGAGTCTGAGGTGGAGCTCAGAGTACCGGCCTTCAGGAACAACATCAATCAGACAGGGCCTGCAGGTCCCTGCAGGGGGGAGAGACATAACATTGTAAAGCTGCTAATGGCCATCCGAACCTGGGCTCAAAGCTAACTAAGTAGACTTCAGGACAGCTCAAGTAACTATAAATATTCTTTAATCTTATCTGACTGTGCTCTCTTTAACACTGAACACATTTAGACTCAGAGTATCAGGTTTCATGGTTGGTGGGCTGTTACTGCCATCTCATTTCAGTTTTATGTGGAGAGGCCTTTTTAAACAGCAGTACAGTCTTGTAGTTTCTTTCCATGACTGGATGTTTTCCCAGGGCATTTATGAGACCTTCCTTTCTGTTCAAGTGAAGCCAGGGTGAGGGCTGTCAACATGTCCTAGCATAGGAGAAACAGATAGACGGGGGATGCAGAAAATTagatatagagggagatagagaataAGACCAATCAAAACGTATACAGACTgtaggaagaggggagggagagagcgggcgagagggagagctagagaaagagagagagaggaagaaagacagcAAGAGAACTACagaagagaggggaatagagtgGCATATCAATCATAGtactgagcgattagtgcttttgaggtgcattcttctgtctcttctgtagTAGGCGTAAATTAAACACAGACAGAACAAGTTGATGTGCAATGGATTAtagtcattgtagttaattaccatgcTTTATGctctaaactatgtagaatattggcttGTTCGGAACTACAACCCCCTACaacaagttcttgaaatgttccgcattgacctctgcagcagaggtaactctagctCGTCCTTTCCTGCGGAAGTCCttacgagagccagtttcatcatagcacttcatggtttttgcgactgcacttgaagaaacgttgaaATTTTCctcattgactgacattcatgtcttacagtaatgatagactgttgtttctctttgcttatttgagctgttctttccataatatggacttggtcttttaccaaatagggctatattttgcaactgattggctcaaacgcattaagaagtaaagaaattccacaaattaacttttaacaaggcacacctgttaattgaaaggcattccaggtgactacctcatgaagctggttgagagaatgccaagtgtgcaaagttgtcatctc

Function

NR:

description
PREDICTED: potassium voltage-gated channel subfamily H member 2-like isoform X3

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1348815 False 382 TUCP 0.58 2 49419570 49426223
TU1348816 True 1394 TUCP 0.44 2 49419570 49422762
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110486684 LOC106601519 coding upstream 35048 49370238 ~ 49384522 (+)
LOC100136718 mlc-2 coding upstream 120319 49295336 ~ 49299251 (+)
LOC110486677 LOC106601591 coding upstream 135454 49281106 ~ 49284116 (+)
LOC110486678 NA coding upstream 152803 49263529 ~ 49266771 (+)
LOC110486670 LOC106606891 coding upstream 206151 49210465 ~ 49213419 (+)
LOC110486690 LOC106606872 coding downstream 96307 49522530 ~ 49530733 (+)
LOC110486693 rundc3a coding downstream 106797 49533020 ~ 49551503 (+)
LOC110486691 LOC106601608 coding downstream 125499 49551722 ~ 49557177 (+)
LOC110486695 LOC106601598 coding downstream 132565 49558788 ~ 49567825 (+)
LOC110486696 LOC106601597 coding downstream 145285 49571508 ~ 49577269 (+)
G1182725 NA non-coding upstream 31392 49386222 ~ 49388178 (+)
G1182724 NA non-coding upstream 54368 49364049 ~ 49365202 (+)
G1182711 LOC106585476 non-coding upstream 67209 49350395 ~ 49352361 (+)
G1182707 NA non-coding upstream 95397 49323938 ~ 49324173 (+)
G1182705 NA non-coding upstream 99439 49319803 ~ 49320131 (+)
G1182750 NA non-coding downstream 12755 49438978 ~ 49439207 (+)
G1182753 NA non-coding downstream 15502 49441725 ~ 49441944 (+)
G1182757 NA non-coding downstream 20232 49446455 ~ 49446770 (+)
G1182761 NA non-coding downstream 22025 49448248 ~ 49448677 (+)
G1182760 NA non-coding downstream 22562 49448785 ~ 49449921 (+)
LOC110486671 LOC100335037 other upstream 216880 49198846 ~ 49202693 (+)
G1182629 NA other upstream 300873 49114975 ~ 49118697 (+)
G1182595 NA other upstream 354428 49063785 ~ 49065142 (+)
ndua4 ndua4 other downstream 154103 49580324 ~ 49584562 (+)
G1183819 NA other downstream 405998 49832221 ~ 49835014 (+)
G1183875 NA other downstream 456598 49882821 ~ 49883435 (+)
G1184435 LOC106606845 other downstream 1559590 50985813 ~ 50986566 (+)
LOC110487554 LOC106601638 other downstream 1957949 51384172 ~ 51394113 (+)

Expression

G1182742 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 40.
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G1182742 Expression in each Bioproject

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G1182742 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network