G1182750


Basic Information

Item Value
gene id G1182750
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49438978 ~ 49439207 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1348824
ACTTATGGCTTCCACATTGCTGAACATGTCGTCATTGTCCAATTTCTGTAAGGTAAATATAATTTCGGTCCCGAACCAAATTAACCACAGCCCGTTCTTGTTGGTCAGTCAGAATTTTGCCTCTGCCTCCCCTATTTGGCCTAGTCTATATTCTGCAGGGAAAATGACAGTAAGAACACATTTAGTCACATCACCTACTCTGTGGTACACATTGGCATGCAGTATACAGT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106613574, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1348824 True 230 lncRNA 0.42 1 49438978 49439207

Neighbor

gene id symbol gene type direction distance location
LOC110486684 LOC106601519 coding upstream 54456 49370238 ~ 49384522 (+)
LOC100136718 mlc-2 coding upstream 139727 49295336 ~ 49299251 (+)
LOC110486677 LOC106601591 coding upstream 154862 49281106 ~ 49284116 (+)
LOC110486678 NA coding upstream 172211 49263529 ~ 49266771 (+)
LOC110486670 LOC106606891 coding upstream 225559 49210465 ~ 49213419 (+)
LOC110486690 LOC106606872 coding downstream 83323 49522530 ~ 49530733 (+)
LOC110486693 rundc3a coding downstream 93813 49533020 ~ 49551503 (+)
LOC110486691 LOC106601608 coding downstream 112515 49551722 ~ 49557177 (+)
LOC110486695 LOC106601598 coding downstream 119581 49558788 ~ 49567825 (+)
LOC110486696 LOC106601597 coding downstream 132301 49571508 ~ 49577269 (+)
G1182725 NA non-coding upstream 50800 49386222 ~ 49388178 (+)
G1182724 NA non-coding upstream 73776 49364049 ~ 49365202 (+)
G1182711 LOC106585476 non-coding upstream 86617 49350395 ~ 49352361 (+)
G1182707 NA non-coding upstream 114805 49323938 ~ 49324173 (+)
G1182705 NA non-coding upstream 118847 49319803 ~ 49320131 (+)
G1182753 NA non-coding downstream 2518 49441725 ~ 49441944 (+)
G1182757 NA non-coding downstream 7248 49446455 ~ 49446770 (+)
G1182761 NA non-coding downstream 9041 49448248 ~ 49448677 (+)
G1182760 NA non-coding downstream 9578 49448785 ~ 49449921 (+)
G1182769 NA non-coding downstream 22698 49461905 ~ 49462166 (+)
G1182742 NA other upstream 12755 49419570 ~ 49426223 (+)
LOC110486671 LOC100335037 other upstream 236288 49198846 ~ 49202693 (+)
G1182629 NA other upstream 320281 49114975 ~ 49118697 (+)
ndua4 ndua4 other downstream 141119 49580324 ~ 49584562 (+)
G1183819 NA other downstream 393014 49832221 ~ 49835014 (+)
G1183875 NA other downstream 443614 49882821 ~ 49883435 (+)
G1184435 LOC106606845 other downstream 1546606 50985813 ~ 50986566 (+)
LOC110487554 LOC106601638 other downstream 1944965 51384172 ~ 51394113 (+)

Expression


Co-expression Network