G1183595



Basic Information


Item Value
gene id G1183595
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49444364 ~ 49444722 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1349832
accccctgtatatagcctccacattgactctgtaccagtaccccctgtatatagcctccacattgactctgtaccagtagcccctgtatatagcctccacattgactctgtaccagtaccccctgtatatagcctccacattgactctgtaccggtaccccgtgtatatagcctcaacattgactctgtaccagtaccccctgtatatagcctccacattgactctgtaccagtaccccctgtatatagcctccacattgactctgtaccggtaccccgtgtatatagcctcaacattgactctgtaccagtaccccctgtatatagcctccacattgactctgtaccagtaccccctg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1349832 True 359 lncRNA 0.49 1 49444364 49444722

Neighbor


gene id symbol gene type direction distance location
kcnh2 kcnh2 coding downstream 15013 49388158 ~ 49429351 (-)
LOC110486683 ccdc47 coding downstream 74505 49365418 ~ 49369859 (-)
setd1a LOC106585476 coding downstream 83130 49346540 ~ 49361234 (-)
hsd3b7 hsd3b7 coding downstream 104507 49326722 ~ 49339857 (-)
LOC110486679 LOC106601593 coding downstream 131375 49300153 ~ 49312989 (-)
LOC100136168 LOC106585555 coding upstream 3520 49448242 ~ 49456279 (-)
LOC110486686 map3k3 coding upstream 23044 49467766 ~ 49485525 (-)
LOC110486687 LOC106601611 coding upstream 42095 49486817 ~ 49504819 (-)
LOC110486688 LOC106601605 coding upstream 70328 49515050 ~ 49522522 (-)
LOC110486692 LOC106606873 coding upstream 86049 49530771 ~ 49533590 (-)
G1183592 NA non-coding downstream 5011 49439151 ~ 49439353 (-)
G1183590 NA non-coding downstream 8383 49435768 ~ 49435981 (-)
G1183588 NA non-coding downstream 11193 49432937 ~ 49433171 (-)
G1183297 NA non-coding downstream 118837 49325027 ~ 49325527 (-)
G1183567 NA non-coding downstream 126881 49317282 ~ 49317483 (-)
G1183604 NA non-coding upstream 16770 49461492 ~ 49461846 (-)
G1183605 NA non-coding upstream 17777 49462499 ~ 49462737 (-)
G1183609 NA non-coding upstream 28710 49473432 ~ 49473756 (-)
G1183620 NA non-coding upstream 67016 49511738 ~ 49512014 (-)
LOC110485205 LOC106597701 other downstream 466956 48959315 ~ 49053966 (-)
LOC110486656 syt3 other downstream 507907 48875671 ~ 48936482 (-)
G1183337 NA other downstream 776282 48667788 ~ 48668082 (-)
G1183225 NA other downstream 973381 48435826 ~ 48470983 (-)
LOC118938314 NA other upstream 92477 49537199 ~ 49544276 (-)
G1183706 NA other upstream 240616 49685338 ~ 49688456 (-)
LOC110486698 LOC106601594 other upstream 390941 49831067 ~ 49853671 (-)
G1184986 NA other upstream 1181925 50626647 ~ 50628539 (-)

Expression



Co-expression Network