G1182769


Basic Information

Item Value
gene id G1182769
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49461905 ~ 49462166 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1348843
cagtatcactgatgtgcagtatcactgatatacagtatcactgatgtgcagtatcactgatgtgcagtatcactgatgtgcagtatcactgatgtgcagtatcactgatgtgcagcaccactgatgtgcagtatcactgatgtgcagtaccactgatatacagtatcactgatgtgcagtatcactgatgtgcagtatcactgatgtgcagtaccactgatatacagtatcactgatgtgcagtatcactgatgtgcagtat

Function

NR:

description
PREDICTED: uncharacterized protein LOC106590899

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1348843 True 262 lncRNA 0.43 1 49461905 49462166

Neighbor

gene id symbol gene type direction distance location
LOC110486684 LOC106601519 coding upstream 77383 49370238 ~ 49384522 (+)
LOC100136718 mlc-2 coding upstream 162654 49295336 ~ 49299251 (+)
LOC110486677 LOC106601591 coding upstream 177789 49281106 ~ 49284116 (+)
LOC110486678 NA coding upstream 195138 49263529 ~ 49266771 (+)
LOC110486670 LOC106606891 coding upstream 248486 49210465 ~ 49213419 (+)
LOC110486690 LOC106606872 coding downstream 60364 49522530 ~ 49530733 (+)
LOC110486693 rundc3a coding downstream 70854 49533020 ~ 49551503 (+)
LOC110486691 LOC106601608 coding downstream 89556 49551722 ~ 49557177 (+)
LOC110486695 LOC106601598 coding downstream 96622 49558788 ~ 49567825 (+)
LOC110486696 LOC106601597 coding downstream 109342 49571508 ~ 49577269 (+)
G1182760 NA non-coding upstream 11984 49448785 ~ 49449921 (+)
G1182761 NA non-coding upstream 13228 49448248 ~ 49448677 (+)
G1182757 NA non-coding upstream 15135 49446455 ~ 49446770 (+)
G1182753 NA non-coding upstream 19961 49441725 ~ 49441944 (+)
G1182750 NA non-coding upstream 22698 49438978 ~ 49439207 (+)
G1182771 NA non-coding downstream 2273 49464439 ~ 49465656 (+)
G1182772 NA non-coding downstream 3549 49465715 ~ 49466209 (+)
G1182773 NA non-coding downstream 4525 49466691 ~ 49467081 (+)
G1182784 NA non-coding downstream 5599 49467765 ~ 49468809 (+)
G1182795 NA non-coding downstream 46527 49508693 ~ 49508910 (+)
G1182742 NA other upstream 35682 49419570 ~ 49426223 (+)
LOC110486671 LOC100335037 other upstream 259215 49198846 ~ 49202693 (+)
G1182629 NA other upstream 343208 49114975 ~ 49118697 (+)
ndua4 ndua4 other downstream 118160 49580324 ~ 49584562 (+)
G1183819 NA other downstream 370055 49832221 ~ 49835014 (+)
G1183875 NA other downstream 420655 49882821 ~ 49883435 (+)
G1184435 LOC106606845 other downstream 1523647 50985813 ~ 50986566 (+)
LOC110487554 LOC106601638 other downstream 1922006 51384172 ~ 51394113 (+)

Expression


Co-expression Network