G1182771


Basic Information

Item Value
gene id G1182771
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49464439 ~ 49465656 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1348845
CACTAATGCTGGGCCCCAGCGGCCCAGAGAAATACCTAACAAACAGAACTGCATAACAAACAGACCCAGACACATAGCACACGAAGAGAACCACATACCTTCCAAGCACTACCACATATCACAAAAACACTACCACTGACCACAATAACATACTGACTACAATAACTCactgaccacaataacactaacagtgaccacaataacactaccactgatcacaataacactaccactgactACAATAACAATACCACTGACaacaataacactaccactgactacaataacactaccactgaccacaataacactaccactgactacaataacactaccactgactacaataacactaccactgactacaataacactaccactgactacaataacactaccactgaccacaataacactaccactgaccacaataacactaccactgactACAATAAAACTACCACTGACTACAATAACATTACCACTGActacaataacactaccactgactacaataacactaccactgactACAATAATCCTACCACTGACTACAATAACTCACTgatcacaataacactaccactgactacaataacactaccactgactacaataacactaccactgaccacaataacactaccactgaccacaataacactaccactgaccacaataacactaccactgactacaataacactaccactgatcacaataacactaccactgactACAATAACCCTACCACTgatcacaataacactaccactgactacaataacactaccactgactacaataacactaccactgactacaataacactaccactgaccacaataacactaccactgaccacaataacactaccactgactACAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1348845 True 890 lncRNA 0.40 2 49464439 49465656

Neighbor

gene id symbol gene type direction distance location
LOC110486684 LOC106601519 coding upstream 79917 49370238 ~ 49384522 (+)
LOC100136718 mlc-2 coding upstream 165188 49295336 ~ 49299251 (+)
LOC110486677 LOC106601591 coding upstream 180323 49281106 ~ 49284116 (+)
LOC110486678 NA coding upstream 197672 49263529 ~ 49266771 (+)
LOC110486670 LOC106606891 coding upstream 251020 49210465 ~ 49213419 (+)
LOC110486690 LOC106606872 coding downstream 56874 49522530 ~ 49530733 (+)
LOC110486693 rundc3a coding downstream 67364 49533020 ~ 49551503 (+)
LOC110486691 LOC106601608 coding downstream 86066 49551722 ~ 49557177 (+)
LOC110486695 LOC106601598 coding downstream 93132 49558788 ~ 49567825 (+)
LOC110486696 LOC106601597 coding downstream 105852 49571508 ~ 49577269 (+)
G1182769 NA non-coding upstream 2273 49461905 ~ 49462166 (+)
G1182760 NA non-coding upstream 14518 49448785 ~ 49449921 (+)
G1182761 NA non-coding upstream 15762 49448248 ~ 49448677 (+)
G1182757 NA non-coding upstream 17669 49446455 ~ 49446770 (+)
G1182753 NA non-coding upstream 22495 49441725 ~ 49441944 (+)
G1182772 NA non-coding downstream 59 49465715 ~ 49466209 (+)
G1182773 NA non-coding downstream 1035 49466691 ~ 49467081 (+)
G1182784 NA non-coding downstream 2109 49467765 ~ 49468809 (+)
G1182795 NA non-coding downstream 43037 49508693 ~ 49508910 (+)
G1182809 NA non-coding downstream 102707 49568363 ~ 49568629 (+)
G1182742 NA other upstream 38216 49419570 ~ 49426223 (+)
LOC110486671 LOC100335037 other upstream 261749 49198846 ~ 49202693 (+)
G1182629 NA other upstream 345742 49114975 ~ 49118697 (+)
ndua4 ndua4 other downstream 114670 49580324 ~ 49584562 (+)
G1183819 NA other downstream 366565 49832221 ~ 49835014 (+)
G1183875 NA other downstream 417165 49882821 ~ 49883435 (+)
G1184435 LOC106606845 other downstream 1520157 50985813 ~ 50986566 (+)
LOC110487554 LOC106601638 other downstream 1918516 51384172 ~ 51394113 (+)

Expression


Co-expression Network