Gene
RNA
| Item | Value |
|---|---|
| gene id | G1183609 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 49473432 ~ 49473756 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1349848 | True | 305 | lncRNA | 0.47 | 2 | 49473432 | 49473756 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136168 | LOC106585555 | coding | downstream | 17153 | 49448242 ~ 49456279 (-) |
| kcnh2 | kcnh2 | coding | downstream | 44081 | 49388158 ~ 49429351 (-) |
| LOC110486683 | ccdc47 | coding | downstream | 103573 | 49365418 ~ 49369859 (-) |
| setd1a | LOC106585476 | coding | downstream | 112198 | 49346540 ~ 49361234 (-) |
| hsd3b7 | hsd3b7 | coding | downstream | 133575 | 49326722 ~ 49339857 (-) |
| LOC110486687 | LOC106601611 | coding | upstream | 13061 | 49486817 ~ 49504819 (-) |
| LOC110486688 | LOC106601605 | coding | upstream | 41294 | 49515050 ~ 49522522 (-) |
| LOC110486692 | LOC106606873 | coding | upstream | 57015 | 49530771 ~ 49533590 (-) |
| LOC118938314 | NA | coding | upstream | 63813 | 49537199 ~ 49544276 (-) |
| LOC110486698 | LOC106601594 | coding | upstream | 357311 | 49831067 ~ 49853671 (-) |
| LOC110486686 | map3k3 | non-coding | downstream | 4615 | 49467766 ~ 49485525 (-) |
| G1183605 | NA | non-coding | downstream | 10695 | 49462499 ~ 49462737 (-) |
| G1183604 | NA | non-coding | downstream | 11586 | 49461492 ~ 49461846 (-) |
| G1183595 | NA | non-coding | downstream | 28710 | 49444364 ~ 49444722 (-) |
| G1183592 | NA | non-coding | downstream | 34079 | 49439151 ~ 49439353 (-) |
| G1183620 | NA | non-coding | upstream | 37982 | 49511738 ~ 49512014 (-) |
| G1183624 | NA | non-coding | upstream | 49828 | 49523584 ~ 49524166 (-) |
| G1183641 | NA | non-coding | upstream | 96218 | 49569974 ~ 49570178 (-) |
| G1183630 | LOC106601597 | non-coding | upstream | 97962 | 49571718 ~ 49577233 (-) |
| G1183629 | NA | non-coding | upstream | 106538 | 49580294 ~ 49663941 (-) |
| LOC110485205 | LOC106597701 | other | downstream | 496024 | 48959315 ~ 49053966 (-) |
| LOC110486656 | syt3 | other | downstream | 536975 | 48875671 ~ 48936482 (-) |
| G1183337 | NA | other | downstream | 805350 | 48667788 ~ 48668082 (-) |
| G1183225 | NA | other | downstream | 1002449 | 48435826 ~ 48470983 (-) |
| G1183706 | NA | other | upstream | 211582 | 49685338 ~ 49688456 (-) |
| G1184986 | NA | other | upstream | 1152891 | 50626647 ~ 50628539 (-) |
