Gene
RNA
| Item | Value |
|---|---|
| gene id | G1183620 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 49511738 ~ 49512014 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1349859 | True | 277 | lncRNA | 0.47 | 1 | 49511738 | 49512014 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486687 | LOC106601611 | coding | downstream | 6919 | 49486817 ~ 49504819 (-) |
| LOC110486686 | map3k3 | coding | downstream | 26213 | 49467766 ~ 49485525 (-) |
| LOC100136168 | LOC106585555 | coding | downstream | 55459 | 49448242 ~ 49456279 (-) |
| kcnh2 | kcnh2 | coding | downstream | 82387 | 49388158 ~ 49429351 (-) |
| LOC110486683 | ccdc47 | coding | downstream | 141879 | 49365418 ~ 49369859 (-) |
| LOC110486688 | LOC106601605 | coding | upstream | 3036 | 49515050 ~ 49522522 (-) |
| LOC110486692 | LOC106606873 | coding | upstream | 18757 | 49530771 ~ 49533590 (-) |
| LOC118938314 | NA | coding | upstream | 25555 | 49537199 ~ 49544276 (-) |
| LOC110486698 | LOC106601594 | coding | upstream | 319053 | 49831067 ~ 49853671 (-) |
| LOC110486699 | LOC106601618 | coding | upstream | 458708 | 49970722 ~ 50040333 (-) |
| G1183609 | NA | non-coding | downstream | 37982 | 49473432 ~ 49473756 (-) |
| G1183605 | NA | non-coding | downstream | 49001 | 49462499 ~ 49462737 (-) |
| G1183604 | NA | non-coding | downstream | 49892 | 49461492 ~ 49461846 (-) |
| G1183595 | NA | non-coding | downstream | 67016 | 49444364 ~ 49444722 (-) |
| G1183624 | NA | non-coding | upstream | 11570 | 49523584 ~ 49524166 (-) |
| G1183641 | NA | non-coding | upstream | 57960 | 49569974 ~ 49570178 (-) |
| G1183630 | LOC106601597 | non-coding | upstream | 59704 | 49571718 ~ 49577233 (-) |
| G1183629 | NA | non-coding | upstream | 68280 | 49580294 ~ 49663941 (-) |
| G1183653 | NA | non-coding | upstream | 95445 | 49607459 ~ 49632702 (-) |
| setd1a | LOC106585476 | other | downstream | 154524 | 49346540 ~ 49361234 (-) |
| LOC110485205 | LOC106597701 | other | downstream | 534330 | 48959315 ~ 49053966 (-) |
| LOC110486656 | syt3 | other | downstream | 575281 | 48875671 ~ 48936482 (-) |
| G1183337 | NA | other | downstream | 843656 | 48667788 ~ 48668082 (-) |
| G1183706 | NA | other | upstream | 173324 | 49685338 ~ 49688456 (-) |
| G1184986 | NA | other | upstream | 1114633 | 50626647 ~ 50628539 (-) |
| LOC110485208 | LOC106606837 | other | upstream | 1244624 | 50732097 ~ 50824433 (-) |
