G1183630 (LOC106601597)


Basic Information

Item Value
gene id G1183630
gene name LOC106601597
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49571718 ~ 49577233 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1349871
ATGTTTAATTGTCATATCAAAACACAGATTCAAGCCATATCATGTCTCCTTCTGTTTAATTGTCATATCAAAACACAGATTCAAGCCATATCATGTCTCCTTCTGTTTAATTGTCATATCAAAACACAGATTCAAGCCATATCATGTCTCCTTCTGTTTAATTGTCATATCAAAACACAGATTCAAGCCATATCATGTCTCCTCTGTTTATTTAATCTGGTTTtaattctctggaaaataattgTACGTTGGCAGATTTTCATCCAGTTTGGCCAAAACCTTCAATAACAGCAATTTATTAAACATAACTATGCTGATACCATATTATGGTTTTCCTTTTACTATGTATTCATGGCATATcctacttttattttttaaaagcaACAAGATTTATCTGTCAGATTGGCCATGAGTATCATAAACAATTTGGTTcatttacagtattttatgtttATTATTTCCATAATACAGAGAGGCTAGTTGTCTGCCAAGATAATAATGGAAATGAAGACTAACATCCTGAGTCAACTACATGGAAGTGTTAAAACTCCTCATCTACAGCATGTCAACATTCAGAATCTTGTGCAGGTCTCAACAACTTGAGATCTGATAATAGAGTTTTACTTGGAAAACTTCTACTAACTGACAAGACAATCGACTCGTTTAATTAGGGTGTTTTTCTGTAACCAATATCTTTACTACGGTTACAAATCTCAGTGAAAACCAGGCATTCCTTGGTGATGAGTTCATGAGGTAAATCTTGGAGCTGAGATTCATAGGCCTGTGTGGTTCAGATGTAGTCCAAAGGGAGGAGCAGCCTCAACAACCACAAGGGATTTGACGTGCATGTTGTCATCTTTCCTCTGCCCACCCATCTCATTCTGCCCCATTTCCTCTTCATGTGGATGTGGTCTTGCGGTCTAAGTAGATGATGCTTGTCTGTCTTAGTAGGTTCAGGAGAATGGGGACGTTTGAAAACATAGGGGCTTCTTTCAtgattatgtaaaaaaaaaatacaattataatATGGTAACTAACAATGACTAAGTGTATGTAGGTGTACTGCCTAGGCAGGATGTGGTAAGAAAATCAGAGAGAGATGGATTTCTGTCCACTGGACTTTCAGTTTGTCAGTTTTGCCATGACATATTCCAGGTTCCTTAGTGTGTGGTCTTCTTTGGTGTCTTGCCAAATTTGGCATCAAACCCGAGACCAAGGAACACCAGGATAGTGCCGACCCACTGCATGGTGTTGAGGACGTTGCCGAACAGAAGGACAGAGCCCAGGATGGTAAAGAACTTCCGTGTGGTAGTGACGATGGAGCAGGTGAGAGGGCCGAAGTACACCACAGTCATGAAGATGAAGGtCTGGCCTAAAGCACTAGTTATTCCAAACAAAAGGATGTTCCAGAAGATGCTGGGGTGACGGTCTGTGAAGCTCAGGAAGTCCCATACCTCACCTGTCCACAACACAcCTAGTCCCAGCACCAGGGTGGACCACATGTTGATGTTGAGCATCATGTGGTTGGCACTGGTCTGGAAGAGATTCCTCATGTGGTCCTGGGCCACACCAGTCAAACCGTCCATGGTCAGCGATAGCAGCAACAGGATCTCCCCGAAGCCGAAAGCAGATTCTGTGGAAGTGACACTCTTGTTGGGTTTATAGAGGAACAGGGCCACCCCGCTGACGATCAACAGCACACACAGGTACTTGGCCAGTGGGTATTTCTTCCTCAGTACAAATACACCCAGAATCATCACTGGGATGGGCTTACAAGACTTCCCCAACACCTGTGTGGGGTAGTTGACATACTGTAGGGCAGAGTTGCTGGATACCATGGCTCCAAGATAAGACAGGGAACACACTCCATAGAGCCAGCTtttggtgtggtctggtctggaacCCTCAAAAAACTGAATCAAGATCCTGGCAAACCCAGCATTGATGATGCATTGGATGAATACCAGCGTTGTGGCATAAACAaacttctccttcttctcccccTCACCATACTGTCCTCGGGTAATTGTTTCTTGTAATATGCCATAGTAAAAATAACAAACGAAGACTCCGAGGAAACAGACAATGAATCGTATACGCTCGTTCTGCAGTAGCGAGGGCTTCCCTGCTCCCTTTCCTGCAGCCATGCTGTCCTCTAGCTGTCCGGGTATGGAAACCGATACAGATCCGATCCCCGTACCCCTCAAAGCAACGTCCCGCTCCACAATCTCAGATATCACAAGCCCGGAAATGGTGACGCTATAACGTTACCCTAACTGGGCAGACAGTTGCTAATGTGACTACAGATCAGTCCGTGGTTCCTCTTCAAATATTTAGCTAAATGTCCCTGTTAGCTAGCtgactttgctagctagctaacgttagttagccaaCGTTAGATTGGTGGGTTGGTTGTTAGCAATTAGCTAAATCCATCATTGTTGTCAATCCAGCTGTCGCAGTATAGTGTTGACTCCGGAATATATGTCCTTAATTGCAGGTCTCCCGTACTAGCAAACGTTACTCCTGTCCCGATCCAGGTTATGTCAAAGGCATCCCATTCGGACAATTCTCCCGGTGGAAAGGATACCGGAGTGTAGTTGTTTT

Function

NR:

description
solute carrier family 35 member B1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1349871 True 2607 lncRNA 0.43 9 49571718 49577233

Neighbor

gene id symbol gene type direction distance location
LOC118938314 NA coding downstream 29969 49537199 ~ 49544276 (-)
LOC110486692 LOC106606873 coding downstream 38128 49530771 ~ 49533590 (-)
LOC110486688 LOC106601605 coding downstream 49196 49515050 ~ 49522522 (-)
LOC110486687 LOC106601611 coding downstream 66899 49486817 ~ 49504819 (-)
LOC110486686 map3k3 coding downstream 86193 49467766 ~ 49485525 (-)
LOC110486698 LOC106601594 coding upstream 253834 49831067 ~ 49853671 (-)
LOC110486699 LOC106601618 coding upstream 393489 49970722 ~ 50040333 (-)
si:ch211-214j24.15 LOC106606868 coding upstream 481801 50059034 ~ 50067398 (-)
LOC110486710 LOC106601657 coding upstream 545957 50123190 ~ 50127201 (-)
LOC110486707 asb16 coding upstream 550322 50127555 ~ 50130302 (-)
G1183641 NA non-coding downstream 1540 49569974 ~ 49570178 (-)
G1183624 NA non-coding downstream 47552 49523584 ~ 49524166 (-)
G1183620 NA non-coding downstream 59704 49511738 ~ 49512014 (-)
G1183609 NA non-coding downstream 97962 49473432 ~ 49473756 (-)
G1183629 NA non-coding upstream 3061 49580294 ~ 49663941 (-)
G1183653 NA non-coding upstream 30226 49607459 ~ 49632702 (-)
G1183728 NA non-coding upstream 137679 49714912 ~ 49715441 (-)
G1183733 NA non-coding upstream 156998 49734231 ~ 49734448 (-)
G1183734 NA non-coding upstream 157383 49734616 ~ 49734820 (-)
setd1a LOC106585476 other downstream 214504 49346540 ~ 49361234 (-)
LOC110485205 LOC106597701 other downstream 594310 48959315 ~ 49053966 (-)
LOC110486656 syt3 other downstream 635261 48875671 ~ 48936482 (-)
G1183706 NA other upstream 108105 49685338 ~ 49688456 (-)
G1184986 NA other upstream 1049414 50626647 ~ 50628539 (-)
LOC110485208 LOC106606837 other upstream 1179405 50732097 ~ 50824433 (-)
G1185046 NA other upstream 1203032 50780265 ~ 50781858 (-)

Expression


Co-expression Network