G1183629


Basic Information

Item Value
gene id G1183629
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49580294 ~ 49663941 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1349869
AGAGAAAAAAACTCCTTCACTTTATTGCTGCACAACCATGAGGTATGAGggaatttttcattttttaaagatgGTTAAAAGGTCAAAGGGGACAGAACTTGTGCAGTTTATCCTCTTTGCATCCACTGGTTTCAAGTTAGAGGTGTAAGGGAAGTCATTTTTTTCCTCAAGTCTTTGGTCCAGCAGAAGACTTTAGAAGTCAGGACCCTCTTTCTTCAGCTTGCTGTAGTCCATGTTCACTGAATAAAACTATGAATTAAATAAAGGAACAATAAAGTTTAAGGAAATCAGAAATCAAATATTGATGAATAACATTCTAAGCAAAAACCTGCCTTTACTTTCTGAATCATTCCCAGGTCTGTTATTTAGTCCGTGTCAAActtgctttgttgttgttgtaactgACAATTAGATAGGTTGATCAGATTACTTAAACTAACAGGATTATACTGTATAATTAATTCTACTATGGGATGAGTGGAATCAGACAGCTCAATTACATTTTTGGCTCAAGCCACTACATTAACATGTTCCCTCACTGCGCTGTACAACCTCTGCTCAAGACCATGTGCGGCAGGGACCAAGTTTAATGCACTGACCATCGTGATACATTAATCCAGACATAACGGATCATCCTGTAAGTGAGTGACCTACCTTGTGCTGCTGTGTGGGTTCCGTCTTGTTCCATGGCTCGGGGTTGCCATTGCGATTCCAACTACAacCTGACATGGGGTCCCATTGCCAGGCGCAAGAGATACGCTCCAGACATAACCGTCCCACCACCGATGAAGATGAAAAGGGGGACTGCTGGGTGGCTTTTAAGTTGCCGGCTAACTGTGCTCAGCATTGTGAGGGTTTACTTCTCCCAATTTGTACAGAAATAACCGGATTAATGTAGGCCTTGCCAGGAAGTAGCTGAGCGTATTTTCAGATGCGTTTCAGAGACATCAATgatttttataactaacccaagatagac

Function

NR:

description
NADH dehydrogenase 1 alpha subcomplex subunit 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1349869 True 979 lncRNA 0.41 4 49580294 49663941

Neighbor

gene id symbol gene type direction distance location
LOC118938314 NA coding downstream 38545 49537199 ~ 49544276 (-)
LOC110486692 LOC106606873 coding downstream 46704 49530771 ~ 49533590 (-)
LOC110486688 LOC106601605 coding downstream 57772 49515050 ~ 49522522 (-)
LOC110486687 LOC106601611 coding downstream 75475 49486817 ~ 49504819 (-)
LOC110486686 map3k3 coding downstream 94769 49467766 ~ 49485525 (-)
LOC110486698 LOC106601594 coding upstream 167126 49831067 ~ 49853671 (-)
LOC110486699 LOC106601618 coding upstream 306781 49970722 ~ 50040333 (-)
si:ch211-214j24.15 LOC106606868 coding upstream 395093 50059034 ~ 50067398 (-)
LOC110486710 LOC106601657 coding upstream 459249 50123190 ~ 50127201 (-)
LOC110486707 asb16 coding upstream 463614 50127555 ~ 50130302 (-)
G1183630 LOC106601597 non-coding downstream 3061 49571718 ~ 49577233 (-)
G1183641 NA non-coding downstream 10116 49569974 ~ 49570178 (-)
G1183624 NA non-coding downstream 56128 49523584 ~ 49524166 (-)
G1183620 NA non-coding downstream 68280 49511738 ~ 49512014 (-)
G1183609 NA non-coding downstream 106538 49473432 ~ 49473756 (-)
G1183728 NA non-coding upstream 50971 49714912 ~ 49715441 (-)
G1183733 NA non-coding upstream 70290 49734231 ~ 49734448 (-)
G1183734 NA non-coding upstream 70675 49734616 ~ 49734820 (-)
G1183739 NA non-coding upstream 72919 49736860 ~ 49737093 (-)
G1183746 NA non-coding upstream 75374 49739315 ~ 49739617 (-)
setd1a LOC106585476 other downstream 223080 49346540 ~ 49361234 (-)
LOC110485205 LOC106597701 other downstream 602886 48959315 ~ 49053966 (-)
LOC110486656 syt3 other downstream 643837 48875671 ~ 48936482 (-)
G1183706 NA other upstream 21397 49685338 ~ 49688456 (-)
G1184986 NA other upstream 962706 50626647 ~ 50628539 (-)
LOC110485208 LOC106606837 other upstream 1092697 50732097 ~ 50824433 (-)
G1185046 NA other upstream 1116324 50780265 ~ 50781858 (-)

Expression


Co-expression Network