Gene
RNA
| Item | Value |
|---|---|
| gene id | G1183727 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 49715126 ~ 49715459 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1349973 | True | 334 | lncRNA | 0.53 | 1 | 49715126 | 49715459 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486697 | spop | coding | upstream | 1512 | 49607479 ~ 49713614 (+) |
| ndua4 | ndua4 | coding | upstream | 130573 | 49580324 ~ 49584562 (+) |
| LOC110486696 | LOC106601597 | coding | upstream | 137857 | 49571508 ~ 49577269 (+) |
| LOC110486695 | LOC106601598 | coding | upstream | 147301 | 49558788 ~ 49567825 (+) |
| LOC110486691 | LOC106601608 | coding | upstream | 157949 | 49551722 ~ 49557177 (+) |
| LOC118938084 | NA | coding | downstream | 83928 | 49799387 ~ 49799839 (+) |
| LOC110486702 | mien1 | coding | downstream | 353433 | 50068892 ~ 50125626 (+) |
| LOC110486703 | NA | coding | downstream | 358146 | 50073605 ~ 50076256 (+) |
| LOC100136769 | LOC100136769 | coding | downstream | 363822 | 50079281 ~ 50090662 (+) |
| LOC110486704 | ubtf | coding | downstream | 375878 | 50091337 ~ 50113963 (+) |
| G1182809 | NA | non-coding | upstream | 146497 | 49568363 ~ 49568629 (+) |
| G1182795 | NA | non-coding | upstream | 206216 | 49508693 ~ 49508910 (+) |
| G1182784 | NA | non-coding | upstream | 246317 | 49467765 ~ 49468809 (+) |
| G1182773 | NA | non-coding | upstream | 248045 | 49466691 ~ 49467081 (+) |
| G1182772 | NA | non-coding | upstream | 248917 | 49465715 ~ 49466209 (+) |
| G1183729 | NA | non-coding | downstream | 16887 | 49732346 ~ 49732859 (+) |
| G1183730 | NA | non-coding | downstream | 17920 | 49733379 ~ 49733590 (+) |
| G1183737 | NA | non-coding | downstream | 20805 | 49736264 ~ 49736493 (+) |
| G1183740 | NA | non-coding | downstream | 21928 | 49737387 ~ 49737651 (+) |
| G1183741 | NA | non-coding | downstream | 22259 | 49737718 ~ 49737960 (+) |
| G1182742 | NA | other | upstream | 288903 | 49419570 ~ 49426223 (+) |
| LOC110486677 | LOC106601591 | other | upstream | 431623 | 49281106 ~ 49284116 (+) |
| LOC110486678 | NA | other | upstream | 448355 | 49263529 ~ 49266771 (+) |
| LOC110486671 | LOC100335037 | other | upstream | 512436 | 49198846 ~ 49202693 (+) |
| G1183819 | NA | other | downstream | 116762 | 49832221 ~ 49835014 (+) |
| G1183875 | NA | other | downstream | 167362 | 49882821 ~ 49883435 (+) |
| G1184435 | LOC106606845 | other | downstream | 1270354 | 50985813 ~ 50986566 (+) |
| LOC110487554 | LOC106601638 | other | downstream | 1668713 | 51384172 ~ 51394113 (+) |
| G1185436 | NA | other | downstream | 1730448 | 51445907 ~ 51446557 (+) |
