G1183729


Basic Information

Item Value
gene id G1183729
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49732346 ~ 49732859 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1349975
ggggaaaggaaGATGTACTGACAATGTACTCACCACTGAAAAGTATCTAATTCAATGGCACCATTGGCTCCTTTTCAAGCTGTGGGTGGCTATCCTGTACGATCTGACTCCGTTACACACTACAACACGTATGATAAGTCTTCTACTCCAtgacccctccctctcctgtGACAAGTGAAAAAGACTGAGGCCTcgggggagagatggaagaggagacGGATGGGGATAATAGCTAGATAGATGAAGGGAGATGATCAGGTGACAGAGATGGGACAAGACAGTGAGAGAAGGAAAACTAGACAGAAAAGGAATTGATCCTCTTGTACAGATCTGTCTGGTTTATTGACGGATCTTGactaaataaatcacaaaactttgtttcaacaacaAACATATGACCTTTTCCCGGTGTGTCTGTTTAGTTTTGTGTAAAAAGCAGGTGTTGGTCTGATTCCTCCGTAGTGTTCTGAGAGGATAGTCTGCAGCACACTGAGGGCAGACAGACACGTTCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1349975 True 514 lncRNA 0.45 1 49732346 49732859

Neighbor

gene id symbol gene type direction distance location
LOC110486697 spop coding upstream 18732 49607479 ~ 49713614 (+)
ndua4 ndua4 coding upstream 147793 49580324 ~ 49584562 (+)
LOC110486696 LOC106601597 coding upstream 155077 49571508 ~ 49577269 (+)
LOC110486695 LOC106601598 coding upstream 164521 49558788 ~ 49567825 (+)
LOC110486691 LOC106601608 coding upstream 175169 49551722 ~ 49557177 (+)
LOC118938084 NA coding downstream 66528 49799387 ~ 49799839 (+)
LOC110486702 mien1 coding downstream 336033 50068892 ~ 50125626 (+)
LOC110486703 NA coding downstream 340746 50073605 ~ 50076256 (+)
LOC100136769 LOC100136769 coding downstream 346422 50079281 ~ 50090662 (+)
LOC110486704 ubtf coding downstream 358478 50091337 ~ 50113963 (+)
G1183727 NA non-coding upstream 16887 49715126 ~ 49715459 (+)
G1182809 NA non-coding upstream 163717 49568363 ~ 49568629 (+)
G1182795 NA non-coding upstream 223436 49508693 ~ 49508910 (+)
G1182784 NA non-coding upstream 263537 49467765 ~ 49468809 (+)
G1182773 NA non-coding upstream 265265 49466691 ~ 49467081 (+)
G1183730 NA non-coding downstream 520 49733379 ~ 49733590 (+)
G1183737 NA non-coding downstream 3405 49736264 ~ 49736493 (+)
G1183740 NA non-coding downstream 4528 49737387 ~ 49737651 (+)
G1183741 NA non-coding downstream 4859 49737718 ~ 49737960 (+)
G1183742 NA non-coding downstream 5240 49738099 ~ 49739007 (+)
G1182742 NA other upstream 306123 49419570 ~ 49426223 (+)
LOC110486677 LOC106601591 other upstream 448843 49281106 ~ 49284116 (+)
LOC110486678 NA other upstream 465575 49263529 ~ 49266771 (+)
LOC110486671 LOC100335037 other upstream 529656 49198846 ~ 49202693 (+)
G1183819 NA other downstream 99362 49832221 ~ 49835014 (+)
G1183875 NA other downstream 149962 49882821 ~ 49883435 (+)
G1184435 LOC106606845 other downstream 1252954 50985813 ~ 50986566 (+)
LOC110487554 LOC106601638 other downstream 1651313 51384172 ~ 51394113 (+)
G1185436 NA other downstream 1713048 51445907 ~ 51446557 (+)

Expression


Co-expression Network