G1183742


Basic Information

Item Value
gene id G1183742
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49738099 ~ 49739007 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1349988
ggttaatgctgtggagggtatagagaggtgttgtgttgactggtcaatctgtggaggatatatagacgtgttgtgttgactggttaatgctgtggagagtATAGAgaagtgttgtgttgactggtcaatctgtggaggatatagagacgtgttgtgttgactggttaatgctgtggagagtATAGAgaagtgttgtgttgactggtcaatctgtggaggatatagagacgtgttgtgttgactggttaatgctgtggagggtattgagacgtgttgtgttgactggttaatgagtgtggagggtattgagacgtgttgtgttgactggttaatgctgtggagggtatagagacgtgttgtgttgactggttaatgctgttgagggtatagagaggtgttgtgttgactggttaatactCTGGAGGGTATAGAGGCTTGTTGTGTTGattggttaatgctgtggagggtatagagacgtgttttGTTGACTGGTCAATCTGTGGAGGATATatagacgtgttgtgttgactggttaatgctgtggaggatatagagatgtgttgtgttgactggttaacgctgtggagggtatagaggcttgttgactggttaatgctctggagggtatagagacgtgttgactggttaatgctgtggagggtatagagacgtgttgactggttaatgctgtggagagtatagagacgtgttgtgttgactggttaatgctgtggagggtatagagaagTATTGTGTTGACTGGTCAATCTGTGGAggatatagagacgtgttgtgttgactggttaatgctgtggaggatatagagacgtgttgtgttgactggttaatgctgtggagggtattgagacgtgttgtgttgactggttaatgctgtggagggtattgaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1349988 True 909 lncRNA 0.44 1 49738099 49739007

Neighbor

gene id symbol gene type direction distance location
LOC110486697 spop coding upstream 24485 49607479 ~ 49713614 (+)
ndua4 ndua4 coding upstream 153546 49580324 ~ 49584562 (+)
LOC110486696 LOC106601597 coding upstream 160830 49571508 ~ 49577269 (+)
LOC110486695 LOC106601598 coding upstream 170274 49558788 ~ 49567825 (+)
LOC110486691 LOC106601608 coding upstream 180922 49551722 ~ 49557177 (+)
LOC118938084 NA coding downstream 60380 49799387 ~ 49799839 (+)
LOC110486702 mien1 coding downstream 329885 50068892 ~ 50125626 (+)
LOC110486703 NA coding downstream 334598 50073605 ~ 50076256 (+)
LOC100136769 LOC100136769 coding downstream 340274 50079281 ~ 50090662 (+)
LOC110486704 ubtf coding downstream 352330 50091337 ~ 50113963 (+)
G1183741 NA non-coding upstream 139 49737718 ~ 49737960 (+)
G1183740 NA non-coding upstream 448 49737387 ~ 49737651 (+)
G1183737 NA non-coding upstream 1606 49736264 ~ 49736493 (+)
G1183730 NA non-coding upstream 4509 49733379 ~ 49733590 (+)
G1183729 NA non-coding upstream 5240 49732346 ~ 49732859 (+)
G1183745 NA non-coding downstream 127 49739134 ~ 49739598 (+)
G1183749 NA non-coding downstream 21507 49760514 ~ 49760726 (+)
G1183751 NA non-coding downstream 22685 49761692 ~ 49761891 (+)
G1183794 NA non-coding downstream 65769 49804776 ~ 49804999 (+)
G1183800 NA non-coding downstream 70944 49809951 ~ 49810160 (+)
G1182742 NA other upstream 311876 49419570 ~ 49426223 (+)
LOC110486677 LOC106601591 other upstream 454596 49281106 ~ 49284116 (+)
LOC110486678 NA other upstream 471328 49263529 ~ 49266771 (+)
LOC110486671 LOC100335037 other upstream 535409 49198846 ~ 49202693 (+)
G1183819 NA other downstream 93214 49832221 ~ 49835014 (+)
G1183875 NA other downstream 143814 49882821 ~ 49883435 (+)
G1184435 LOC106606845 other downstream 1246806 50985813 ~ 50986566 (+)
LOC110487554 LOC106601638 other downstream 1645165 51384172 ~ 51394113 (+)
G1185436 NA other downstream 1706900 51445907 ~ 51446557 (+)

Expression


Co-expression Network