G1183800


Basic Information

Item Value
gene id G1183800
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49809951 ~ 49810160 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1350048
ACACAGCACTGTGTTCTAATTGGCCAGAGATATGACAACATTAAAGGGTGTCAGCACAGAGAACAGCGTTTTAATTCTGGGTTAATGATGATGTTTATTTCCCCCGGTACTCATTCCTAAGAGCTATGGCTTTATGCAGTAGTAGTGgctagctgtagctgtggtctCTATGGGGAGAATACTGAATTCTGTCTTAAGGTAGTTTAGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1350048 True 210 lncRNA 0.42 1 49809951 49810160

Neighbor

gene id symbol gene type direction distance location
LOC118938084 NA coding upstream 10112 49799387 ~ 49799839 (+)
LOC110486697 spop coding upstream 96337 49607479 ~ 49713614 (+)
ndua4 ndua4 coding upstream 225398 49580324 ~ 49584562 (+)
LOC110486696 LOC106601597 coding upstream 232682 49571508 ~ 49577269 (+)
LOC110486695 LOC106601598 coding upstream 242126 49558788 ~ 49567825 (+)
LOC110486702 mien1 coding downstream 258732 50068892 ~ 50125626 (+)
LOC110486703 NA coding downstream 263445 50073605 ~ 50076256 (+)
LOC100136769 LOC100136769 coding downstream 269121 50079281 ~ 50090662 (+)
LOC110486704 ubtf coding downstream 281177 50091337 ~ 50113963 (+)
LOC110486708 LOC106606819 coding downstream 304208 50114368 ~ 50123426 (+)
G1183794 NA non-coding upstream 4952 49804776 ~ 49804999 (+)
G1183751 NA non-coding upstream 48060 49761692 ~ 49761891 (+)
G1183749 NA non-coding upstream 49225 49760514 ~ 49760726 (+)
G1183745 NA non-coding upstream 70353 49739134 ~ 49739598 (+)
G1183742 NA non-coding upstream 70944 49738099 ~ 49739007 (+)
G1183820 LOC106601594 non-coding downstream 24944 49835104 ~ 49836400 (+)
G1183822 NA non-coding downstream 28075 49838235 ~ 49838511 (+)
G1183874 NA non-coding downstream 72189 49882349 ~ 49882668 (+)
G1183880 NA non-coding downstream 77103 49887263 ~ 49887488 (+)
G1183887 NA non-coding downstream 83925 49894085 ~ 49894301 (+)
G1182742 NA other upstream 383728 49419570 ~ 49426223 (+)
LOC110486677 LOC106601591 other upstream 526448 49281106 ~ 49284116 (+)
LOC110486678 NA other upstream 543180 49263529 ~ 49266771 (+)
LOC110486671 LOC100335037 other upstream 607261 49198846 ~ 49202693 (+)
G1183819 NA other downstream 22061 49832221 ~ 49835014 (+)
G1183875 NA other downstream 72661 49882821 ~ 49883435 (+)
G1184435 LOC106606845 other downstream 1175653 50985813 ~ 50986566 (+)
LOC110487554 LOC106601638 other downstream 1574012 51384172 ~ 51394113 (+)
G1185436 NA other downstream 1635747 51445907 ~ 51446557 (+)

Expression


Co-expression Network