G1183819


Basic Information

Item Value
gene id G1183819
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49832221 ~ 49835014 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1350070
aggaagagtagctgctgcttctgcaaaagctaatggggatcccaataaacaaacaaataaagtGCACTTGGACTCCAATATGTTTTGAATACTGTCTAGACTGTGCATGCTTACTACTGTATAATGATATTCTATTGATGGTTGCATGGGGCACATTTTCCCAAAAGGTAGCAAGCACTAACAACTAATGCAGAGCATTACATCATTTTTTGTCTTCAATCGCTTCCTTTCATGTTTAATTTGTTCCTAAGAGGTCCAAAACAGCCTCTTAACAATTGCAAATATTCACCAGAAAGCTGTCATGCAAACAACAGTAATCtgaatgtaatgtttacatgTCAAATACTGACTTAATAAATCCCAAACAAATTGTTTAGGAAAGGAGTATTGTACACTCATTTCACTTGAAATTAGCTCATTCAGATTACTGGACTCTTGTGGACGGGTGTTTACTTTTTAAATTCAGACTCATTGAATTCCGACTAATTCCAGATTATTAGTGTGCATTTAAACACAGCAGGTGTGACTATGAGGATTGACTGTGACACAAGTGATTAAACCAGACAGATCTATTTTACAAACATCATCTCAACAAGGGAGAACCACCGCAGCCAAACCACTGCATATTGTCTTTTCAAGTAAAACATTTGCTCAGAGGAAAAACAAATCAACCGGAAGCATCAGGGGTCTGAAGTGTAGATTGGGGTTTATGTGTCTGAATAAACAGTAATATCTTAAAAGATAATTTAGTCTTTGTGATGTTAGTGGTTAATGTTCCCTGCTGGACCCTGCAGGGCTGTTCAAGTAGCAGTAGAGACAGGCGGTCAGAGGGAGGCAGCAGAGACAGGCGGtcagagagaggcagcagagacaGGCGGtcagagagaggcagcagagacaGGCGGtcagagagaggcagcagagacaggtggtcagagagaggcggtcagagagaggcagcagagacaGGCGGtcagagagaggcagcagagaggcagtctaagagaggcagcagagaggcagTCTAAGAGAGGCAGCAACTGCAGCAACGGCAGCAGAGAGAGGCAGTAGAGAGGCAGCAACGGCAGCAGAGAGAGGCAGTCTGAGAGAGGCAGTCTAAGAGAGGCAGCAACGGCAGCAGAGAGAGGCAGTctgagagaggcagcagagaggcagTCTAAGAGAGGCAGCAactgcagcagagagaggcagCCTGAGAGAGGCAGTCTGAGAGAAGCAGCAACGGCAGCAGCCTAACAGAGATGTTGTGGTTATGGCCTCATAAAGACAGGAGCTACCCGCCTCTTTAACAGTAaattaaacacacagacactttgATGTTCAGATCTCACTTACAGTACTTCCTATATATAGCCTTGTGAGTGAGCCTTTCTCTCttttattctgtctctctcttctattccACCTATACAGTCAAATTGCTCCATCTCTACCTGACGTGATGCTCCCGTACCCCCCACAGGAGGAGGACTTTATAGTGAGTGGTTCCTGATCCAAGTCACACACTGGCCTCCCAGGCCTCAGTGCTACAGAAACCTCACTAAGCTCTCTCCAGACCAATCAGAGCACAGCAGTGCCAAAGGCCATGGGGTTCAATCACTTCCGTTACAATGAGGTTTTTCCTTTTTACAAATACATTAGTAATACCATATCTTATGCATTCAGTGTTCAAAGTATGACACCTGCCATTGGAAAATACAGAGTCAGGAAATCACGTAGTCTATATAGGTGCTATGAGTCAATTTCCAAACAGCCCATATTGTCAGTACAGAATCAGTTGTCCCTAAAttagatatatacagtattttgtcTAGTGTTGTTGTTTGTGAATTGGACATGAGTTCAGCCAGCCAGTGGCTATTCATCTTGATGAGATAGCAGTTAACTGAGGGCTAAGCTGCTGGGCCAGGGAGCCATAACACAACTATCCACTATACCCCTCGCTGTGCTCCTCGCTCGCATCCTAATAATCCTAACTTGATTTCCAGGAATACATTTCGCCTTCTCTCGGTGAAGCCTTAATTAGTTTTATTTTAATGTATTCCAGATAACGATCAGACTTTGGTGAACACACAGCGTTTGTCAGGAAAGAGAAATCAAGCACACACAGCCAAAGTTATCAAAGCTTGAAATCAGGAATCCTGACTGCAACAAAATGTAATCTTTTTCATACAGAGGGGACAATAGAAGGAGCTGAATTCTCtacatctccttctctctattcCACTTTAATTAAAAGAGCTCTCTGAATCTCtcatttctccccctctccctctcccacttttgttctctctctctctctctctctctctctttctctctctccctctttcattctttctttctttctcaatcTATATTTTCTATGTCAAAGAGGTTACATAattcagggaaagagagagatgatgtTTGACAGAATGTCATACCTTTAGAATAAACattggatggggagagagaggggtgggatagcCTATCGGGATGACataggggtggggagagagaggggtgggatagcCTATCGGGATGACataggggtggggagagagaggggtgggatagcCTATCGGGATGACataggggtggggagagagaggggtgggatagcCTATCGGGATGACataggggtggggagagagaggggtgggatagcCTATCGGGATGACataggggtggggagagagaggggtgggatagcCTATCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1350070 True 2722 TUCP 0.45 2 49832221 49835014

Neighbor

gene id symbol gene type direction distance location
LOC118938084 NA coding upstream 32382 49799387 ~ 49799839 (+)
LOC110486697 spop coding upstream 118607 49607479 ~ 49713614 (+)
ndua4 ndua4 coding upstream 247668 49580324 ~ 49584562 (+)
LOC110486696 LOC106601597 coding upstream 254952 49571508 ~ 49577269 (+)
LOC110486695 LOC106601598 coding upstream 264396 49558788 ~ 49567825 (+)
LOC110486702 mien1 coding downstream 233878 50068892 ~ 50125626 (+)
LOC110486703 NA coding downstream 238591 50073605 ~ 50076256 (+)
LOC100136769 LOC100136769 coding downstream 244267 50079281 ~ 50090662 (+)
LOC110486704 ubtf coding downstream 256323 50091337 ~ 50113963 (+)
LOC110486708 LOC106606819 coding downstream 279354 50114368 ~ 50123426 (+)
G1183800 NA non-coding upstream 22061 49809951 ~ 49810160 (+)
G1183794 NA non-coding upstream 27222 49804776 ~ 49804999 (+)
G1183751 NA non-coding upstream 70330 49761692 ~ 49761891 (+)
G1183749 NA non-coding upstream 71495 49760514 ~ 49760726 (+)
G1183745 NA non-coding upstream 92623 49739134 ~ 49739598 (+)
G1183820 LOC106601594 non-coding downstream 90 49835104 ~ 49836400 (+)
G1183822 NA non-coding downstream 3221 49838235 ~ 49838511 (+)
G1183874 NA non-coding downstream 47335 49882349 ~ 49882668 (+)
G1183880 NA non-coding downstream 52249 49887263 ~ 49887488 (+)
G1183887 NA non-coding downstream 59071 49894085 ~ 49894301 (+)
G1182742 NA other upstream 405998 49419570 ~ 49426223 (+)
LOC110486677 LOC106601591 other upstream 548718 49281106 ~ 49284116 (+)
LOC110486678 NA other upstream 565450 49263529 ~ 49266771 (+)
LOC110486671 LOC100335037 other upstream 629531 49198846 ~ 49202693 (+)
G1183875 NA other downstream 47807 49882821 ~ 49883435 (+)
G1184435 LOC106606845 other downstream 1150799 50985813 ~ 50986566 (+)
LOC110487554 LOC106601638 other downstream 1549158 51384172 ~ 51394113 (+)
G1185436 NA other downstream 1610893 51445907 ~ 51446557 (+)
G1185521 NA other downstream 1792668 51627682 ~ 51628676 (+)

Expression


Co-expression Network