G1183874


Basic Information

Item Value
gene id G1183874
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49882349 ~ 49882668 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1350148
gccttgcgaaaatattcggcccccttgaactttgtgaccttttgccacatttcaggcttcaaacataaagatacaaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaatggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaattactaatgatgataaatacaatccacctgtgtgtaatca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1350148 True 320 lncRNA 0.36 1 49882349 49882668

Neighbor

gene id symbol gene type direction distance location
LOC118938084 NA coding upstream 82510 49799387 ~ 49799839 (+)
LOC110486697 spop coding upstream 168735 49607479 ~ 49713614 (+)
ndua4 ndua4 coding upstream 297796 49580324 ~ 49584562 (+)
LOC110486696 LOC106601597 coding upstream 305080 49571508 ~ 49577269 (+)
LOC110486695 LOC106601598 coding upstream 314524 49558788 ~ 49567825 (+)
LOC110486702 mien1 coding downstream 186224 50068892 ~ 50125626 (+)
LOC110486703 NA coding downstream 190937 50073605 ~ 50076256 (+)
LOC100136769 LOC100136769 coding downstream 196613 50079281 ~ 50090662 (+)
LOC110486704 ubtf coding downstream 208669 50091337 ~ 50113963 (+)
LOC110486708 LOC106606819 coding downstream 231700 50114368 ~ 50123426 (+)
G1183822 NA non-coding upstream 43838 49838235 ~ 49838511 (+)
G1183820 LOC106601594 non-coding upstream 45949 49835104 ~ 49836400 (+)
G1183800 NA non-coding upstream 72189 49809951 ~ 49810160 (+)
G1183794 NA non-coding upstream 77350 49804776 ~ 49804999 (+)
G1183751 NA non-coding upstream 120458 49761692 ~ 49761891 (+)
G1183880 NA non-coding downstream 4595 49887263 ~ 49887488 (+)
G1183887 NA non-coding downstream 11417 49894085 ~ 49894301 (+)
G1183888 NA non-coding downstream 12353 49895021 ~ 49895970 (+)
G1183896 NA non-coding downstream 30847 49913515 ~ 49915651 (+)
G1183901 NA non-coding downstream 38477 49921145 ~ 49921527 (+)
G1183819 NA other upstream 47335 49832221 ~ 49835014 (+)
G1182742 NA other upstream 456126 49419570 ~ 49426223 (+)
LOC110486677 LOC106601591 other upstream 598846 49281106 ~ 49284116 (+)
LOC110486678 NA other upstream 615578 49263529 ~ 49266771 (+)
G1183875 NA other downstream 153 49882821 ~ 49883435 (+)
G1184435 LOC106606845 other downstream 1103145 50985813 ~ 50986566 (+)
LOC110487554 LOC106601638 other downstream 1501504 51384172 ~ 51394113 (+)
G1185436 NA other downstream 1563239 51445907 ~ 51446557 (+)
G1185521 NA other downstream 1745014 51627682 ~ 51628676 (+)

Expression


Co-expression Network