G1183880


Basic Information

Item Value
gene id G1183880
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49887263 ~ 49887488 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1350154
gtattgtgtaacatgaagtcctatgagtgtcatctgatgaagatcatcaaaggttagtgattcattttatctctatttgtgctttttgtgactcctctcttggctggaaaaattgctgttttttctgtgagttggtggtcacctaacataatcgtttgtggtgctttcgctgtaaagtctatttgaaatcagacactgtggtgggattaacaacacggtataagat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1350154 True 226 lncRNA 0.38 1 49887263 49887488

Neighbor

gene id symbol gene type direction distance location
LOC118938084 NA coding upstream 87424 49799387 ~ 49799839 (+)
LOC110486697 spop coding upstream 173649 49607479 ~ 49713614 (+)
ndua4 ndua4 coding upstream 302710 49580324 ~ 49584562 (+)
LOC110486696 LOC106601597 coding upstream 309994 49571508 ~ 49577269 (+)
LOC110486695 LOC106601598 coding upstream 319438 49558788 ~ 49567825 (+)
LOC110486702 mien1 coding downstream 181404 50068892 ~ 50125626 (+)
LOC110486703 NA coding downstream 186117 50073605 ~ 50076256 (+)
LOC100136769 LOC100136769 coding downstream 191793 50079281 ~ 50090662 (+)
LOC110486704 ubtf coding downstream 203849 50091337 ~ 50113963 (+)
LOC110486708 LOC106606819 coding downstream 226880 50114368 ~ 50123426 (+)
G1183874 NA non-coding upstream 4595 49882349 ~ 49882668 (+)
G1183822 NA non-coding upstream 48752 49838235 ~ 49838511 (+)
G1183820 LOC106601594 non-coding upstream 50863 49835104 ~ 49836400 (+)
G1183800 NA non-coding upstream 77103 49809951 ~ 49810160 (+)
G1183794 NA non-coding upstream 82264 49804776 ~ 49804999 (+)
G1183887 NA non-coding downstream 6597 49894085 ~ 49894301 (+)
G1183888 NA non-coding downstream 7533 49895021 ~ 49895970 (+)
G1183896 NA non-coding downstream 26027 49913515 ~ 49915651 (+)
G1183901 NA non-coding downstream 33657 49921145 ~ 49921527 (+)
G1183904 NA non-coding downstream 44902 49932390 ~ 49945729 (+)
G1183875 NA other upstream 3828 49882821 ~ 49883435 (+)
G1183819 NA other upstream 52249 49832221 ~ 49835014 (+)
G1182742 NA other upstream 461040 49419570 ~ 49426223 (+)
LOC110486677 LOC106601591 other upstream 603760 49281106 ~ 49284116 (+)
G1184435 LOC106606845 other downstream 1098325 50985813 ~ 50986566 (+)
LOC110487554 LOC106601638 other downstream 1496684 51384172 ~ 51394113 (+)
G1185436 NA other downstream 1558419 51445907 ~ 51446557 (+)
G1185521 NA other downstream 1740194 51627682 ~ 51628676 (+)
G1185527 NA other downstream 1764125 51651613 ~ 51653770 (+)

Expression


Co-expression Network