G1184592



Basic Information


Item Value
gene id G1184592
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49912632 ~ 49915531 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1350966
atcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatctaatgacaaccatataaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcccaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaattacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgtcctacatcctaatctaatgacaaccatatcaacttgttctacatcccaatctaatgacaaccatatcaacttgttttacatcc
>TU1350965
ctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcccaatctaatgacaaccatataaacttgttttacatcccaatctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgtccTACATCccaatgacaaccatatcaacttgttctacatcctaattaCAACCacatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcatAATGACAACCAtgtcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccacatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatctaatgacaaccatagcaacttgttctacatcctaatctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgtcctacatcctaatctaatgacaaccatatcaacttgttttACATCCCAAATCTAATGaaaaccatatcaacttgttctacatcctaattacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcccaatctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatctaatgacaaccatataaACTTGTTTTACATCCCAAATCTAATGaaaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccatataaacttgttctacatcataatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccatataaacttgttctacatcataatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcctaatgacaaccatatcaacttgttctacatcc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1350966 False 354 lncRNA 0.34 2 49912632 49913221
TU1350965 True 1468 lncRNA 0.34 2 49913547 49915531

Neighbor


gene id symbol gene type direction distance location
LOC110486698 LOC106601594 coding downstream 58961 49831067 ~ 49853671 (-)
LOC118938314 NA coding downstream 370883 49537199 ~ 49544276 (-)
LOC110486692 LOC106606873 coding downstream 379042 49530771 ~ 49533590 (-)
LOC110486688 LOC106601605 coding downstream 390110 49515050 ~ 49522522 (-)
LOC110486687 LOC106601611 coding downstream 407813 49486817 ~ 49504819 (-)
LOC110486699 LOC106601618 coding upstream 55191 49970722 ~ 50040333 (-)
si:ch211-214j24.15 LOC106606868 coding upstream 143503 50059034 ~ 50067398 (-)
LOC110486710 LOC106601657 coding upstream 207659 50123190 ~ 50127201 (-)
LOC110486707 asb16 coding upstream 212024 50127555 ~ 50130302 (-)
LOC110486713 NA coding upstream 715474 50631005 ~ 50633690 (-)
G1183882 NA non-coding downstream 23008 49889328 ~ 49889624 (-)
G1183844 NA non-coding downstream 60430 49852000 ~ 49852202 (-)
G1183842 NA non-coding downstream 62728 49849669 ~ 49849904 (-)
G1183835 NA non-coding downstream 74761 49837669 ~ 49837871 (-)
G1183833 NA non-coding downstream 81585 49830482 ~ 49831047 (-)
G1184598 NA non-coding upstream 10668 49926199 ~ 49926444 (-)
G1184639 NA non-coding upstream 95171 50010702 ~ 50012131 (-)
G1184640 NA non-coding upstream 98720 50014251 ~ 50014683 (-)
G1184656 NA non-coding upstream 127257 50042788 ~ 50043118 (-)
G1184661 NA non-coding upstream 133255 50048786 ~ 50065188 (-)
G1183706 NA other downstream 224176 49685338 ~ 49688456 (-)
setd1a LOC106585476 other downstream 555418 49346540 ~ 49361234 (-)
G1184986 NA other upstream 711116 50626647 ~ 50628539 (-)
LOC110485208 LOC106606837 other upstream 841107 50732097 ~ 50824433 (-)
G1185046 NA other upstream 864734 50780265 ~ 50781858 (-)
G1186080 NA other upstream 1406269 51321800 ~ 51323931 (-)
G1186075 NA other upstream 1436778 51352309 ~ 51373954 (-)

Expression



Co-expression Network