G1183904


Basic Information

Item Value
gene id G1183904
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49932390 ~ 49945729 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1350186
catctgtctctcctcccctctgttttacatctgtctctcctcccctctgttttacatctgtctctcctcccctctgttttacatctgtctctcctccattcagttttacatctgtctctcctccgctctgctttacatctgtctctcctcccctctgttttacatctgtctctcctcccctctgttttacatctgtctctcctcccctctgttttacatctgtctctcctcccctctgttttacatctgtctctcctcccctctg

Function

NR:

description
high mobility group nucleosome-binding domain-containing protein 5-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1350186 True 265 lncRNA 0.49 2 49932390 49945729

Neighbor

gene id symbol gene type direction distance location
LOC118938084 NA coding upstream 132551 49799387 ~ 49799839 (+)
LOC110486697 spop coding upstream 218776 49607479 ~ 49713614 (+)
ndua4 ndua4 coding upstream 347837 49580324 ~ 49584562 (+)
LOC110486696 LOC106601597 coding upstream 355121 49571508 ~ 49577269 (+)
LOC110486695 LOC106601598 coding upstream 364565 49558788 ~ 49567825 (+)
LOC110486702 mien1 coding downstream 123163 50068892 ~ 50125626 (+)
LOC110486703 NA coding downstream 127876 50073605 ~ 50076256 (+)
LOC100136769 LOC100136769 coding downstream 133552 50079281 ~ 50090662 (+)
LOC110486704 ubtf coding downstream 145608 50091337 ~ 50113963 (+)
LOC110486708 LOC106606819 coding downstream 168639 50114368 ~ 50123426 (+)
G1183901 NA non-coding upstream 10863 49921145 ~ 49921527 (+)
G1183896 NA non-coding upstream 16739 49913515 ~ 49915651 (+)
G1183888 NA non-coding upstream 36420 49895021 ~ 49895970 (+)
G1183887 NA non-coding upstream 38089 49894085 ~ 49894301 (+)
G1183880 NA non-coding upstream 44902 49887263 ~ 49887488 (+)
G1183917 NA non-coding downstream 13049 49958778 ~ 49959289 (+)
G1183891 NA non-coding downstream 24768 49970497 ~ 49970732 (+)
G1183890 NA non-coding downstream 25033 49970762 ~ 49974534 (+)
G1183972 NA non-coding downstream 96991 50042720 ~ 50043002 (+)
G1183973 NA non-coding downstream 97409 50043138 ~ 50043347 (+)
G1183875 NA other upstream 48955 49882821 ~ 49883435 (+)
G1183819 NA other upstream 97376 49832221 ~ 49835014 (+)
G1182742 NA other upstream 506167 49419570 ~ 49426223 (+)
LOC110486677 LOC106601591 other upstream 648887 49281106 ~ 49284116 (+)
G1184435 LOC106606845 other downstream 1040084 50985813 ~ 50986566 (+)
LOC110487554 LOC106601638 other downstream 1438443 51384172 ~ 51394113 (+)
G1185436 NA other downstream 1500178 51445907 ~ 51446557 (+)
G1185521 NA other downstream 1681953 51627682 ~ 51628676 (+)
G1185527 NA other downstream 1705884 51651613 ~ 51653770 (+)

Expression


Co-expression Network