G1184673


Basic Information

Item Value
gene id G1184673
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 50053593 ~ 50056236 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351051
gagaggggccgacttcggcggaagtcgtgacaacatcatgggaaaatcaaaagaaatcagctaagacctcagaaaaacaattgtagatctccacacgtctggttcatccttgggagcaatttccaaatgcctgaaggtaccatgttcatctgtacaaataatagtacgcaagtataaacaccattggaccacgcagccgtcatacttttcaggaaggagacgcgttctgtctcctagagatgaacatactttggtgagaaaagtgcaaatcaatcccagaacaacagcaaaggaccctgtgaagatgctggaggaaacaggtccaaaagtatctatatccacagttaaacaagtcctatatcgacataaccttcaaaggacgctcagcaaggaagaaggcactgctccaaaaccgccataaaaaagccagactacggtttgcaactgcacatgggggacaaagatcatactttttgaagaaatgtcctctggtctgatggccataatgaccattgttatgtttggaggaaaaagggggaggcttgcaagccgaagaacaccaacccaatgtgaagcacgggggtggcagcatcatgttgagggggtgctttgctgcaggagggattggtgcacttcacaaaatagcttcatgagggaggaaaattatgtggatatattgaagcaacatctcaagacatcagtcacaaagttaaagcttggtcgcaaatgggtcttccaaatggacaatgaccacaagcatacttccaaagttgtggaaaaatagcttaaggacaacaaagtcaaggtattggagtggccatcacaaagccctgacctcaatcctatagaaaatatgtgggcagaactgaaaaaagcgtgtgtgagcaaggaggcctacaaacctgactcagttacaccagctctatcaggagaaatgattcacctaacttattgtgggaaccttgtggaaggctacccaaaacgtttgacccaagttaaatattttaaaggcaatgctaccaaatactaattgagtgtatgtaaacttctgacccactgggaatatgatgaaataaataaaagctgaaataaataattctctctactattattctgacatttcacatttttaaaataaagtggtgatcctaactgacctaagacagggaaatgttactaggattaaagtcaggaattgtgaaaaactgagtttaaatgtatttggctaaggtgtatgtaaacttctgacttcaactgtatatactgtattttatacaatctattgcatcttgtctatgccgctcTGTTGTTGCTCATccgtatatttatatattcttattccattcctttacttagatttgtgtgttttcAGTAGCTGTTGTGgaagattacttgttagatattgctgcactgtcagaactagaagcacaagaatttcgcAAACcatcgcaataacatctgctaaccatgtgtatgtgcccaataaaaaat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351051 True 1491 lncRNA 0.41 2 50053593 50056236

Neighbor

gene id symbol gene type direction distance location
LOC110486699 LOC106601618 coding downstream 13260 49970722 ~ 50040333 (-)
LOC110486698 LOC106601594 coding downstream 199922 49831067 ~ 49853671 (-)
LOC118938314 NA coding downstream 511844 49537199 ~ 49544276 (-)
LOC110486692 LOC106606873 coding downstream 520003 49530771 ~ 49533590 (-)
LOC110486688 LOC106601605 coding downstream 531071 49515050 ~ 49522522 (-)
si:ch211-214j24.15 LOC106606868 coding upstream 2798 50059034 ~ 50067398 (-)
LOC110486710 LOC106601657 coding upstream 66954 50123190 ~ 50127201 (-)
LOC110486707 asb16 coding upstream 71319 50127555 ~ 50130302 (-)
LOC110486713 NA coding upstream 574769 50631005 ~ 50633690 (-)
LOC110486716 LOC106601616 coding upstream 591198 50647434 ~ 50653284 (-)
G1184656 NA non-coding downstream 10475 50042788 ~ 50043118 (-)
G1184640 NA non-coding downstream 38910 50014251 ~ 50014683 (-)
G1184639 NA non-coding downstream 41462 50010702 ~ 50012131 (-)
G1184598 NA non-coding downstream 127149 49926199 ~ 49926444 (-)
G1184592 NA non-coding downstream 138062 49912632 ~ 49915531 (-)
G1184667 NA non-coding upstream 8730 50064966 ~ 50135362 (-)
G1184668 LOC100136769 non-coding upstream 22907 50079143 ~ 50084716 (-)
G1184670 NA non-coding upstream 31845 50088081 ~ 50153315 (-)
G1184665 NA non-coding upstream 34215 50090451 ~ 50138282 (-)
G1184671 LOC106601648 non-coding upstream 35980 50092216 ~ 50095111 (-)
G1183706 NA other downstream 365137 49685338 ~ 49688456 (-)
LOC110486687 LOC106601611 other downstream 549583 49486817 ~ 49504819 (-)
setd1a LOC106585476 other downstream 696379 49346540 ~ 49361234 (-)
G1184986 NA other upstream 570411 50626647 ~ 50628539 (-)
LOC110485208 LOC106606837 other upstream 700402 50732097 ~ 50824433 (-)
G1185046 NA other upstream 724029 50780265 ~ 50781858 (-)
G1186080 NA other upstream 1265564 51321800 ~ 51323931 (-)
G1186075 NA other upstream 1296073 51352309 ~ 51373954 (-)

Expression


Co-expression Network