G1184668 (LOC100136769)


Basic Information

Item Value
gene id G1184668
gene name LOC100136769
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 50079143 ~ 50084716 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351045
GTGGGATTTAGATCCTAAGACTAGTGTTACCTGCTTGGTGACAGAGAAGGTCTGCATCTCGATGTCTCCTCCCAGGGGTTGAGCTACAGCTCCCTCAGACTGACTGCGTCTCTGCAGTAGAGCCCTCAGCAGGCCATCTCTATCAGCGGCACGGATCTCACCCTTGCTCCGCAATTCATCCACCACCTTCTCAGCCACAGCAGACAGACTGCTGGCTTGCAGGTCCAGAATGATCTTGCGAAGCTGGATCAGACTCTTGAAGGTGAGGTAGGAGACGTGGGAGGGGCCCCACTTGCCCGTTGCTGGGTTAAAATTCTCCTCATAGCCCACCCAGCGGCCAGTCTCCTGCCAGCTGTTGCCCATGAGCTCATTCAGCTCTACATAggcCTGAGCATCCCCTCTGGTGTTGGCGTTGGTGTTCAGGTTCAGATAGGCCTCTGGGTCGGTGTGAACGACGATGCTCTGGATGGCCTGGTTGCTGTCCTCTTCCTGCCTGCTCTGCTCCAGGTCATAGTTGCCACTGTGGCCCGGTGGGgtcGGTCTGATCGGAGATGGGAAAGCAGAGTCACTCTCCTCCTCATAGGACATGACATCCTCTCCAAAAGACAGGTCGTTCTCCATTGGAGTGTGTCAGTGCTTGCTTCGTCTGTCCTTAAACTTTCAGCAACGTTTGTGCATACCCCAATGATAGAGTGATCTGGGGCggatggagaggcagagagagagagagagagaaaatggagggAACACCCATTTGAAAGTACGCCGGGGCAAGAAACGCTGTACTACGTTCAGCACCAAAGGGTATAGAGAGATAAGGCCTGTGTGACAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351045 True 832 lncRNA 0.55 7 50079143 50084716

Neighbor

gene id symbol gene type direction distance location
si:ch211-214j24.15 LOC106606868 coding downstream 11745 50059034 ~ 50067398 (-)
LOC110486699 LOC106601618 coding downstream 38810 49970722 ~ 50040333 (-)
LOC110486698 LOC106601594 coding downstream 225472 49831067 ~ 49853671 (-)
LOC118938314 NA coding downstream 537394 49537199 ~ 49544276 (-)
LOC110486692 LOC106606873 coding downstream 545553 49530771 ~ 49533590 (-)
LOC110486710 LOC106601657 coding upstream 38474 50123190 ~ 50127201 (-)
LOC110486707 asb16 coding upstream 42839 50127555 ~ 50130302 (-)
LOC110486713 NA coding upstream 546289 50631005 ~ 50633690 (-)
LOC110486716 LOC106601616 coding upstream 562718 50647434 ~ 50653284 (-)
LOC110486719 LOC105013088 coding upstream 605466 50690182 ~ 50697090 (-)
G1184661 NA non-coding downstream 13955 50048786 ~ 50065188 (-)
G1184673 NA non-coding downstream 22907 50053593 ~ 50056236 (-)
G1184656 NA non-coding downstream 36025 50042788 ~ 50043118 (-)
G1184640 NA non-coding downstream 64460 50014251 ~ 50014683 (-)
G1184639 NA non-coding downstream 67012 50010702 ~ 50012131 (-)
G1184670 NA non-coding upstream 3365 50088081 ~ 50153315 (-)
G1184665 NA non-coding upstream 5735 50090451 ~ 50138282 (-)
G1184671 LOC106601648 non-coding upstream 7500 50092216 ~ 50095111 (-)
G1184669 NA non-coding upstream 7844 50092560 ~ 50093070 (-)
G1184672 LOC106606818 non-coding upstream 18863 50103579 ~ 50105066 (-)
G1183706 NA other downstream 390687 49685338 ~ 49688456 (-)
LOC110486687 LOC106601611 other downstream 575133 49486817 ~ 49504819 (-)
setd1a LOC106585476 other downstream 721929 49346540 ~ 49361234 (-)
G1184986 NA other upstream 541931 50626647 ~ 50628539 (-)
LOC110485208 LOC106606837 other upstream 671922 50732097 ~ 50824433 (-)
G1185046 NA other upstream 695549 50780265 ~ 50781858 (-)
G1186080 NA other upstream 1237084 51321800 ~ 51323931 (-)
G1186075 NA other upstream 1267593 51352309 ~ 51373954 (-)

Expression


Co-expression Network