Gene
RNA
| Item | Value |
|---|---|
| gene id | G1184296 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 50600949 ~ 50601164 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1350606 | True | 216 | lncRNA | 0.36 | 1 | 50600949 | 50601164 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486711 | asic2 | coding | upstream | 517 | 50152380 ~ 50600432 (+) |
| LOC110486706 | LOC106601646 | coding | upstream | 464957 | 50130444 ~ 50135992 (+) |
| LOC110486708 | LOC106606819 | coding | upstream | 477523 | 50114368 ~ 50123426 (+) |
| LOC110486704 | ubtf | coding | upstream | 486986 | 50091337 ~ 50113963 (+) |
| LOC100136769 | LOC100136769 | coding | upstream | 510293 | 50079281 ~ 50090662 (+) |
| LOC110486712 | LOC106600671 | coding | downstream | 24556 | 50625720 ~ 50631000 (+) |
| LOC110486714 | LOC106601613 | coding | downstream | 37357 | 50638521 ~ 50641453 (+) |
| LOC110486715 | LOC106601614 | coding | downstream | 43496 | 50644660 ~ 50647403 (+) |
| LOC110486720 | LOC106606512 | coding | downstream | 53857 | 50655021 ~ 50658896 (+) |
| LOC110486718 | LOC106606839 | coding | downstream | 58049 | 50659213 ~ 50681790 (+) |
| G1184178 | NA | non-coding | upstream | 182004 | 50417696 ~ 50418945 (+) |
| G1184078 | NA | non-coding | upstream | 333451 | 50267023 ~ 50267498 (+) |
| G1184046 | NA | non-coding | upstream | 380811 | 50219052 ~ 50220138 (+) |
| LOC110486702 | mien1 | non-coding | upstream | 475323 | 50068892 ~ 50125626 (+) |
| G1184298 | NA | non-coding | downstream | 1616 | 50602780 ~ 50603353 (+) |
| G1184302 | NA | non-coding | downstream | 6927 | 50608091 ~ 50608517 (+) |
| G1184308 | NA | non-coding | downstream | 12396 | 50613560 ~ 50614105 (+) |
| G1184328 | NA | non-coding | downstream | 86559 | 50687723 ~ 50687995 (+) |
| G1184329 | NA | non-coding | downstream | 91990 | 50693154 ~ 50693400 (+) |
| G1183875 | NA | other | upstream | 717514 | 49882821 ~ 49883435 (+) |
| G1183819 | NA | other | upstream | 765935 | 49832221 ~ 49835014 (+) |
| ndua4 | ndua4 | other | upstream | 1016387 | 49580324 ~ 49584562 (+) |
| G1182742 | NA | other | upstream | 1174726 | 49419570 ~ 49426223 (+) |
| LOC110486677 | LOC106601591 | other | upstream | 1317446 | 49281106 ~ 49284116 (+) |
| G1184435 | LOC106606845 | other | downstream | 384649 | 50985813 ~ 50986566 (+) |
| LOC110487554 | LOC106601638 | other | downstream | 783008 | 51384172 ~ 51394113 (+) |
| G1185436 | NA | other | downstream | 844743 | 51445907 ~ 51446557 (+) |
| G1185521 | NA | other | downstream | 1026518 | 51627682 ~ 51628676 (+) |
| G1185527 | NA | other | downstream | 1050449 | 51651613 ~ 51653770 (+) |
