G1184308


Basic Information

Item Value
gene id G1184308
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 50613560 ~ 50614105 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1350618
gggacaagggctataaaacttttcagacacaccctCCATTCCCTTCCTATATagcccttgacgacaacataacttcctgttccgaggatatGAGGGTGACGGTCCTATGTCAGCATGGTTCAGATAATACCTACAggacgaagccaacatcagcaggagctttggttgcgaatggtatgaactttgaactcttattcactacagaagtgatacctcctagctgttgagttagcgaccgcaggttaggaaggaacagacagagtatcccgtctatcacacaatgacgttactacaacgtatccaattgacaaccagagacattcttcaaaggacagaggactcggtttggcaacacggccttccatctaccaccaacctactgaagcgcagctcagagtaaatatttattgcattttccttttccaaatgggcggtaatttagaatgcataagatactgtatttacgatagcacagcttcgcctttgttcctgtcttcccgctctttcactcaacccagccccttttcctttgtgtaacaagccgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1350618 True 546 lncRNA 0.45 1 50613560 50614105

Neighbor

gene id symbol gene type direction distance location
LOC110486711 asic2 coding upstream 13128 50152380 ~ 50600432 (+)
LOC110486706 LOC106601646 coding upstream 477568 50130444 ~ 50135992 (+)
LOC110486708 LOC106606819 coding upstream 490134 50114368 ~ 50123426 (+)
LOC110486704 ubtf coding upstream 499597 50091337 ~ 50113963 (+)
LOC100136769 LOC100136769 coding upstream 522904 50079281 ~ 50090662 (+)
LOC110486712 LOC106600671 coding downstream 11615 50625720 ~ 50631000 (+)
LOC110486714 LOC106601613 coding downstream 24416 50638521 ~ 50641453 (+)
LOC110486715 LOC106601614 coding downstream 30555 50644660 ~ 50647403 (+)
LOC110486720 LOC106606512 coding downstream 40916 50655021 ~ 50658896 (+)
LOC110486718 LOC106606839 coding downstream 45108 50659213 ~ 50681790 (+)
G1184302 NA non-coding upstream 5043 50608091 ~ 50608517 (+)
G1184298 NA non-coding upstream 10207 50602780 ~ 50603353 (+)
G1184296 NA non-coding upstream 12396 50600949 ~ 50601164 (+)
G1184178 NA non-coding upstream 194615 50417696 ~ 50418945 (+)
G1184078 NA non-coding upstream 346062 50267023 ~ 50267498 (+)
G1184328 NA non-coding downstream 73618 50687723 ~ 50687995 (+)
G1184329 NA non-coding downstream 79049 50693154 ~ 50693400 (+)
G1184330 NA non-coding downstream 81470 50695575 ~ 50696906 (+)
G1184326 NA non-coding downstream 93768 50707873 ~ 50708719 (+)
G1184337 NA non-coding downstream 107060 50721165 ~ 50721497 (+)
G1183875 NA other upstream 730125 49882821 ~ 49883435 (+)
G1183819 NA other upstream 778546 49832221 ~ 49835014 (+)
ndua4 ndua4 other upstream 1028998 49580324 ~ 49584562 (+)
G1182742 NA other upstream 1187337 49419570 ~ 49426223 (+)
LOC110486677 LOC106601591 other upstream 1330057 49281106 ~ 49284116 (+)
G1184435 LOC106606845 other downstream 371708 50985813 ~ 50986566 (+)
LOC110487554 LOC106601638 other downstream 770067 51384172 ~ 51394113 (+)
G1185436 NA other downstream 831802 51445907 ~ 51446557 (+)
G1185521 NA other downstream 1013577 51627682 ~ 51628676 (+)
G1185527 NA other downstream 1037508 51651613 ~ 51653770 (+)

Expression


Co-expression Network