G1184978


Basic Information

Item Value
gene id G1184978
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 50707867 ~ 50708718 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351379
ATTttgtacaattttatttgatatttACAAATTTGCCAGTCTTTGCAACAACTAAAATACCACCAAATGCCAAGGGGACCTCATTTGTTCAAAGGATAGGTCAAATTAAAAGCAGATTGCTAACACCTATTTGTCAAATACAATTCTGGgtgcctaataataataataatacagaatGTCTGCAAATTTTATAACTATTTTAACTTTTCCATCAAAGGAAAACATTTTCAAATAAAGCAAATATTTTTTAACAAAAAAGTTAAACCGAGATTACACATCTCTACATTCATGTGAAACCACATTTATCTGTTAAAATTAAATAATAGTGGAACTCCACTTGGAGTGGAATGATAGATGGGTAAGTGTTGACTGATCATTACAACCTCAATGACAATCAATCAAATTCATTACATCTCGCAACGGAAACTGTTTAGCATTTGAGAACCAAAACAGCAGGAAACGATGcaggacctacctgaatttgtccaataaaaacAATTTGTTACAAAACATTTTCCATTTGGCGTAAAACTTTTGTGCAACAGattaaacgttttgcaacagaatcagcGTAATGAATGCACCCCAGGTTAAAATATGTATTTCAAGTACTTGAAAATGTAACATTATTCAAATAATTCCGACATATTTTAATAATACAACTGATGCACTACTTGGCTATTTTACAGTTTGTCAACTGTCATTTTTGGAATGATTTTCTTATTTACCACAGATGCCTAGGCTTGCTTTACCTCAAACAATGTGCTTCAAAAATCAGTTCACTACATACTGTAGGCTGcgttcacacaggcagcccacctctgatctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351379 True 829 lncRNA 0.33 2 50707867 50708718

Neighbor

gene id symbol gene type direction distance location
LOC110486719 LOC105013088 coding downstream 10777 50690182 ~ 50697090 (-)
LOC110486716 LOC106601616 coding downstream 54583 50647434 ~ 50653284 (-)
LOC110486713 NA coding downstream 74177 50631005 ~ 50633690 (-)
LOC110486707 asb16 coding downstream 577565 50127555 ~ 50130302 (-)
LOC110486710 LOC106601657 coding downstream 580666 50123190 ~ 50127201 (-)
LOC118938085 NA coding upstream 11094 50719812 ~ 50730095 (-)
LOC110485208 LOC106606837 coding upstream 23379 50732097 ~ 50824433 (-)
LOC110486728 qtrt1 coding upstream 118677 50827395 ~ 50832708 (-)
LOC118938315 NA coding upstream 158610 50867328 ~ 50868744 (-)
LOC110486730 tmed1 coding upstream 167797 50876515 ~ 50883694 (-)
G1184979 NA non-coding downstream 3885 50703479 ~ 50703982 (-)
G1185010 NA non-coding downstream 13838 50693822 ~ 50694029 (-)
G1184995 NA non-coding downstream 26103 50678539 ~ 50681764 (-)
G1184965 NA non-coding downstream 99063 50608605 ~ 50608804 (-)
G1184964 NA non-coding downstream 99544 50607969 ~ 50608323 (-)
G1185012 NA non-coding upstream 174 50708892 ~ 50709127 (-)
G1185048 NA non-coding upstream 76759 50785477 ~ 50786800 (-)
G1185123 NA non-coding upstream 227640 50936358 ~ 50936584 (-)
G1185154 NA non-coding upstream 281655 50990373 ~ 50991627 (-)
G1184986 NA other downstream 79328 50626647 ~ 50628539 (-)
LOC110486698 LOC106601594 other downstream 871535 49831067 ~ 49853671 (-)
G1183706 NA other downstream 1019411 49685338 ~ 49688456 (-)
LOC118938314 NA other downstream 1163591 49537199 ~ 49544276 (-)
LOC110486687 LOC106601611 other downstream 1203857 49486817 ~ 49504819 (-)
G1185046 NA other upstream 71547 50780265 ~ 50781858 (-)
G1186080 NA other upstream 613082 51321800 ~ 51323931 (-)
G1186075 NA other upstream 643591 51352309 ~ 51373954 (-)
G1186154 NA other upstream 781059 51489777 ~ 51490241 (-)

Expression


Co-expression Network