G1184352 (LOC106594965)


Basic Information

Item Value
gene id G1184352
gene name LOC106594965
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 50746383 ~ 50746651 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1350666
GCGATGATGCTGTGGACAGGCAGTCTGGTGAGTCCATGGTAGATGGTCTGGGGCCCCACCCCcctgtcactgcccttggggccCCCCCGCGTGGGCTCTCTGTGGCCCCTGACAAAAGCTGAGTTCTCCTCCTTGGAAATGTTGATGTAGAAGCAGGTGTCTGAGCCGCCCATGATGTGGCCGGGACCTGGGTTCAGCAGGATGTTGGCATTTTCCAGCCTCCGCACTCCGATCAGACACACACCATACCTGACCGAGGAGGAGCGGAT

Function

NR:

description
potassium channel subfamily T member 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1350666 True 269 lncRNA 0.61 1 50746383 50746651

Neighbor

gene id symbol gene type direction distance location
LOC110486723 LOC106601660 coding upstream 26564 50715377 ~ 50719819 (+)
LOC110486722 LOC106606841 coding upstream 31940 50709612 ~ 50714443 (+)
LOC110486721 dnjb1 coding upstream 42085 50699063 ~ 50704298 (+)
LOC110486717 LOC108442215 coding upstream 56381 50682397 ~ 50690002 (+)
LOC110486718 LOC106606839 coding upstream 64593 50659213 ~ 50681790 (+)
dnm2a NA coding downstream 86153 50832804 ~ 50876302 (+)
LOC110486729 light coding downstream 139078 50885729 ~ 50894479 (+)
LOC110485209 LOC105013079 coding downstream 192923 50939574 ~ 50965217 (+)
LOC110486733 LOC106606838 coding downstream 244843 50991494 ~ 50992842 (+)
LOC110486735 LOC100380774 coding downstream 597727 51344378 ~ 51373991 (+)
G1184338 NA non-coding upstream 21546 50724610 ~ 50724837 (+)
G1184337 NA non-coding upstream 24886 50721165 ~ 50721497 (+)
G1184326 NA non-coding upstream 37664 50707873 ~ 50708719 (+)
G1184330 NA non-coding upstream 49477 50695575 ~ 50696906 (+)
G1184329 NA non-coding upstream 52983 50693154 ~ 50693400 (+)
G1184359 NA non-coding downstream 10857 50757508 ~ 50757901 (+)
G1184361 NA non-coding downstream 13856 50760507 ~ 50768578 (+)
G1184362 NA non-coding downstream 15858 50762509 ~ 50780797 (+)
G1184363 NA non-coding downstream 16310 50762961 ~ 50770488 (+)
G1184364 NA non-coding downstream 22593 50769244 ~ 50774985 (+)
G1183875 NA other upstream 862948 49882821 ~ 49883435 (+)
G1183819 NA other upstream 911369 49832221 ~ 49835014 (+)
ndua4 ndua4 other upstream 1161821 49580324 ~ 49584562 (+)
G1182742 NA other upstream 1320160 49419570 ~ 49426223 (+)
LOC110486677 LOC106601591 other upstream 1462880 49281106 ~ 49284116 (+)
G1184435 LOC106606845 other downstream 239162 50985813 ~ 50986566 (+)
LOC110487554 LOC106601638 other downstream 637521 51384172 ~ 51394113 (+)
G1185436 NA other downstream 699256 51445907 ~ 51446557 (+)
G1185521 NA other downstream 881031 51627682 ~ 51628676 (+)
G1185527 NA other downstream 904962 51651613 ~ 51653770 (+)

Expression


Co-expression Network