Gene
RNA
| Item | Value |
|---|---|
| gene id | G1184362 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 50762509 ~ 50780797 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1350679 | True | 418 | lncRNA | 0.47 | 3 | 50762509 | 50780797 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486723 | LOC106601660 | coding | upstream | 42690 | 50715377 ~ 50719819 (+) |
| LOC110486722 | LOC106606841 | coding | upstream | 48066 | 50709612 ~ 50714443 (+) |
| LOC110486721 | dnjb1 | coding | upstream | 58211 | 50699063 ~ 50704298 (+) |
| LOC110486717 | LOC108442215 | coding | upstream | 72507 | 50682397 ~ 50690002 (+) |
| LOC110486718 | LOC106606839 | coding | upstream | 80719 | 50659213 ~ 50681790 (+) |
| dnm2a | NA | coding | downstream | 52007 | 50832804 ~ 50876302 (+) |
| LOC110486729 | light | coding | downstream | 104932 | 50885729 ~ 50894479 (+) |
| LOC110485209 | LOC105013079 | coding | downstream | 158777 | 50939574 ~ 50965217 (+) |
| LOC110486733 | LOC106606838 | coding | downstream | 210697 | 50991494 ~ 50992842 (+) |
| LOC110486735 | LOC100380774 | coding | downstream | 563581 | 51344378 ~ 51373991 (+) |
| G1184359 | NA | non-coding | upstream | 4608 | 50757508 ~ 50757901 (+) |
| G1184352 | LOC106594965 | non-coding | upstream | 15858 | 50746383 ~ 50746651 (+) |
| G1184338 | NA | non-coding | upstream | 37672 | 50724610 ~ 50724837 (+) |
| G1184337 | NA | non-coding | upstream | 41012 | 50721165 ~ 50721497 (+) |
| G1184326 | NA | non-coding | upstream | 53790 | 50707873 ~ 50708719 (+) |
| G1184368 | NA | non-coding | downstream | 4546 | 50785343 ~ 50786408 (+) |
| G1184369 | NA | non-coding | downstream | 4728 | 50785525 ~ 50787090 (+) |
| G1184427 | NA | non-coding | downstream | 144994 | 50925791 ~ 50926011 (+) |
| G1184441 | NA | non-coding | downstream | 164124 | 50944921 ~ 50946135 (+) |
| G1184443 | NA | non-coding | downstream | 222720 | 51003517 ~ 51007979 (+) |
| G1183875 | NA | other | upstream | 879074 | 49882821 ~ 49883435 (+) |
| G1183819 | NA | other | upstream | 927495 | 49832221 ~ 49835014 (+) |
| ndua4 | ndua4 | other | upstream | 1177947 | 49580324 ~ 49584562 (+) |
| G1182742 | NA | other | upstream | 1336286 | 49419570 ~ 49426223 (+) |
| LOC110486677 | LOC106601591 | other | upstream | 1479006 | 49281106 ~ 49284116 (+) |
| G1184435 | LOC106606845 | other | downstream | 205016 | 50985813 ~ 50986566 (+) |
| LOC110487554 | LOC106601638 | other | downstream | 603375 | 51384172 ~ 51394113 (+) |
| G1185436 | NA | other | downstream | 665110 | 51445907 ~ 51446557 (+) |
| G1185521 | NA | other | downstream | 846885 | 51627682 ~ 51628676 (+) |
| G1185527 | NA | other | downstream | 870816 | 51651613 ~ 51653770 (+) |
