Gene
RNA
| Item | Value |
|---|---|
| gene id | G1184367 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 50778836 ~ 50787112 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1350686 | False | 448 | lncRNA | 0.48 | 3 | 50778836 | 50786024 |
| TU1350687 | True | 221 | lncRNA | 0.48 | 4 | 50782955 | 50787112 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486723 | LOC106601660 | coding | upstream | 59017 | 50715377 ~ 50719819 (+) |
| LOC110486722 | LOC106606841 | coding | upstream | 64393 | 50709612 ~ 50714443 (+) |
| LOC110486721 | dnjb1 | coding | upstream | 74538 | 50699063 ~ 50704298 (+) |
| LOC110486717 | LOC108442215 | coding | upstream | 88834 | 50682397 ~ 50690002 (+) |
| LOC110486718 | LOC106606839 | coding | upstream | 97046 | 50659213 ~ 50681790 (+) |
| dnm2a | NA | coding | downstream | 45692 | 50832804 ~ 50876302 (+) |
| LOC110486729 | light | coding | downstream | 98617 | 50885729 ~ 50894479 (+) |
| LOC110485209 | LOC105013079 | coding | downstream | 152462 | 50939574 ~ 50965217 (+) |
| LOC110486733 | LOC106606838 | coding | downstream | 204382 | 50991494 ~ 50992842 (+) |
| LOC110486735 | LOC100380774 | coding | downstream | 557266 | 51344378 ~ 51373991 (+) |
| G1184364 | NA | non-coding | upstream | 3851 | 50769244 ~ 50774985 (+) |
| G1184363 | NA | non-coding | upstream | 8348 | 50762961 ~ 50770488 (+) |
| G1184361 | NA | non-coding | upstream | 10258 | 50760507 ~ 50768578 (+) |
| G1184359 | NA | non-coding | upstream | 20935 | 50757508 ~ 50757901 (+) |
| G1184352 | LOC106594965 | non-coding | upstream | 32185 | 50746383 ~ 50746651 (+) |
| G1184427 | NA | non-coding | downstream | 138679 | 50925791 ~ 50926011 (+) |
| G1184441 | NA | non-coding | downstream | 157809 | 50944921 ~ 50946135 (+) |
| G1184443 | NA | non-coding | downstream | 216405 | 51003517 ~ 51007979 (+) |
| G1184575 | NA | non-coding | downstream | 423297 | 51210409 ~ 51210919 (+) |
| G1185283 | NA | non-coding | downstream | 443356 | 51230468 ~ 51230739 (+) |
| G1183875 | NA | other | upstream | 895401 | 49882821 ~ 49883435 (+) |
| G1183819 | NA | other | upstream | 943822 | 49832221 ~ 49835014 (+) |
| ndua4 | ndua4 | other | upstream | 1194274 | 49580324 ~ 49584562 (+) |
| G1182742 | NA | other | upstream | 1352613 | 49419570 ~ 49426223 (+) |
| LOC110486677 | LOC106601591 | other | upstream | 1495333 | 49281106 ~ 49284116 (+) |
| G1184435 | LOC106606845 | other | downstream | 198701 | 50985813 ~ 50986566 (+) |
| LOC110487554 | LOC106601638 | other | downstream | 597060 | 51384172 ~ 51394113 (+) |
| G1185436 | NA | other | downstream | 658795 | 51445907 ~ 51446557 (+) |
| G1185521 | NA | other | downstream | 840570 | 51627682 ~ 51628676 (+) |
| G1185527 | NA | other | downstream | 864501 | 51651613 ~ 51653770 (+) |
