G1185048


Basic Information

Item Value
gene id G1185048
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 50785477 ~ 50786800 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351449
cctcaacccacctactgtctatcactaccacaacccacctactgtctatctatcactacctcaaaccacctactgttatctatcactacctcaaatcacctactgtctatctatcactacctcaacccacctactgtctgtctgtcactaccactacctcaacccacctactgtctatctatcactacctcaacccaccaacggtccatcactatcactacctcaacccacctactgtctatctatcactacctaaacctacctactgtctctctatcactacctcaacccacctactgtctttctatcactacctcaaaccacctactgttatctatcactacctcaacccacctactctctgtcactaccactacctcaaccaacctactgtctatctatcactacctcaacccaccaacggtccatcactatcactacctcaacccacctactgtctgtctattactacctcaacccacctactggctatctatcactacctcaacccacctactgtctatctatcacttcctcaacccacctactgtctgtctatcactacctcaacccacctactgtctatctatcactacctcaacccacctactgtctttcacttcctcaacccacctactgtctcactatcactacctcaacccacctactgtctgtcactatcactacctcaacccacctactgtatgtctatcactacctcaacccacctactgtctgtctatcactacctcaacccaactactgtctatctatcactacctcaacccacctactgtctgtctatcactacctcaacccatctatcactacctcaacccacctagcactacctcaacccacctactgtctgtgtatcacttcctcaacccacctactgtctgtgtatcacttcctcaacccaccttctgtctgtctatcacttcctcaacccacctactgcctgtctgtcacaacctcaacccacctactgtctgtctatcactaccacaACCCACCTACTgttatctatcactacctcaacccacctactgtctgtcactaccactacctcaacccacctactgtctatttatcactacctcaacccacctactgtctgtctatcactacctcaacccacctactgtctgtctatcactacctcaacccaccaacggtccaccactatcactacctcaacccacctactgtctgtctatcactacctcaacccacctactgtctgtctatcactacctcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351449 True 1262 lncRNA 0.47 2 50785477 50786800

Neighbor

gene id symbol gene type direction distance location
LOC118938085 NA coding downstream 55382 50719812 ~ 50730095 (-)
LOC110486719 LOC105013088 coding downstream 88387 50690182 ~ 50697090 (-)
LOC110486716 LOC106601616 coding downstream 132193 50647434 ~ 50653284 (-)
LOC110486713 NA coding downstream 151787 50631005 ~ 50633690 (-)
LOC110486707 asb16 coding downstream 655175 50127555 ~ 50130302 (-)
LOC110486728 qtrt1 coding upstream 40595 50827395 ~ 50832708 (-)
LOC118938315 NA coding upstream 80528 50867328 ~ 50868744 (-)
LOC110486730 tmed1 coding upstream 89715 50876515 ~ 50883694 (-)
LOC110485210 adgrl1 coding upstream 223819 51010619 ~ 51230197 (-)
LOC110486734 LOC106606824 coding upstream 538106 51324906 ~ 51329316 (-)
G1185012 NA non-coding downstream 76350 50708892 ~ 50709127 (-)
G1184978 NA non-coding downstream 76759 50707867 ~ 50708718 (-)
G1184979 NA non-coding downstream 81495 50703479 ~ 50703982 (-)
G1185010 NA non-coding downstream 91448 50693822 ~ 50694029 (-)
G1184995 NA non-coding downstream 103713 50678539 ~ 50681764 (-)
LOC110485208 LOC106606837 non-coding upstream 2801 50732097 ~ 50824433 (-)
G1185123 NA non-coding upstream 149558 50936358 ~ 50936584 (-)
G1185154 NA non-coding upstream 203573 50990373 ~ 50991627 (-)
G1185128 NA non-coding upstream 216691 51003491 ~ 51007735 (-)
G1185194 NA non-coding upstream 277323 51064123 ~ 51082403 (-)
G1185046 NA other downstream 3619 50780265 ~ 50781858 (-)
G1184986 NA other downstream 156938 50626647 ~ 50628539 (-)
LOC110486698 LOC106601594 other downstream 949145 49831067 ~ 49853671 (-)
G1183706 NA other downstream 1097021 49685338 ~ 49688456 (-)
G1186080 NA other upstream 535000 51321800 ~ 51323931 (-)
G1186075 NA other upstream 565509 51352309 ~ 51373954 (-)
G1186154 NA other upstream 702977 51489777 ~ 51490241 (-)
G1186381 NA other upstream 1138163 51924963 ~ 52030660 (-)
G1186216 NA other upstream 1223890 52010690 ~ 52011211 (-)

Expression


Co-expression Network