G1184441


Basic Information

Item Value
gene id G1184441
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 50944921 ~ 50946135 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1350778
ACTTTGCTCAGTGTGGTCCCTTCTTTACTGCAGTGAAGTAAACATGTTAACACTATGGTATGGCATtataaatgactgttattaacacggtggtatggcattatgaatgactgttattaacacggtggtatggcattatgaatgactgttattaacacggtggtatggcattataaatgactgttattaaCACGGTGGTATGGCATTATGAATGACTGTTATTAACACGGTGGTATGGCATTATGAATGACTGTTATTAACACGGTGGTATGGCATTATGAATGACTGTTATTAACACGGTGGTATGGCATTATGAATGACTGTTATTAACACGGTGGTATGGCATTACGAATGACTGTTATTAACACGGTGGTATGGCATTATGAATGATTGTTATTAACACGGTGGTATGGCATTATGAATGACTGTTATTAACACGGTGGTATGGCATTACGAATGACTGTTATTAACACGGTGGTATGGCATTATGAATGACTGTTATTAACACGGTGGTATGGCATTACGAATGACTGTTATTAACACGGTGGTATGGCATTATGAATGACTGTTATTAACACGGTGGTATGGCATTACGAATGACTGTTATTAACACGGTGGTATGGCATTATGAATGACTGTTATTAACACGGTAGTATGGCATTATGAATGACTGTTATTAACACGGTGGTATGGCATTATGAATGACTGTTATTAACACGGTGGTATGGCATTATGAATGACTGTTATTAACACGGTGGTATGGCATTATGAATGACTGTTATTAACACGGTGGTATGGCATTATGAATGACTGTTATTAACACGGTGGTATGGCATTACGAATGACTGTTATTAACACGGTGGTATGGCATTATGAATGACTGTCATTAACACGGTGGTATGGCATTATGAATGACTGTTAATCAGAGTCCAAAACCAGGATCAATTCATAATGAAGGCTTTCACTTTGGCTTTGACTTAAATACGGtgtgtgaccgtgtgtgtgtgtgtgtgtgtgtgaccaggtaATACTGTCCCCTAGATCAAAAATATGTCTAAGTGGGATGATTGATGTTTCACAGTGAGagcatttttctactgtgtcagtATGTCTCTCAAGCATACGGATGTCTCAATCTGTGTGTGAGCATTTCTCCTGCACGCATTATCAAGCTTTCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1350778 True 1180 lncRNA 0.38 2 50944921 50946135

Neighbor

gene id symbol gene type direction distance location
LOC110486729 light coding upstream 50442 50885729 ~ 50894479 (+)
dnm2a NA coding upstream 68619 50832804 ~ 50876302 (+)
LOC110486723 LOC106601660 coding upstream 225102 50715377 ~ 50719819 (+)
LOC110486722 LOC106606841 coding upstream 230478 50709612 ~ 50714443 (+)
LOC110486721 dnjb1 coding upstream 240623 50699063 ~ 50704298 (+)
LOC110486733 LOC106606838 coding downstream 45359 50991494 ~ 50992842 (+)
LOC110486735 LOC100380774 coding downstream 398243 51344378 ~ 51373991 (+)
LOC110487554 LOC106601638 coding downstream 445725 51384172 ~ 51394113 (+)
LOC110486737 LOC106606772 coding downstream 448301 51394436 ~ 51404580 (+)
LOC110486745 LOC106601712 coding downstream 616229 51562364 ~ 51566331 (+)
G1184427 NA non-coding upstream 18910 50925791 ~ 50926011 (+)
G1184367 NA non-coding upstream 157809 50778836 ~ 50787112 (+)
G1184369 NA non-coding upstream 157831 50785525 ~ 50787090 (+)
G1184368 NA non-coding upstream 158513 50785343 ~ 50786408 (+)
G1184362 NA non-coding upstream 164124 50762509 ~ 50780797 (+)
G1184443 NA non-coding downstream 57382 51003517 ~ 51007979 (+)
G1184575 NA non-coding downstream 264274 51210409 ~ 51210919 (+)
G1185283 NA non-coding downstream 284333 51230468 ~ 51230739 (+)
G1185285 NA non-coding downstream 285867 51232002 ~ 51232438 (+)
G1185289 NA non-coding downstream 291482 51237617 ~ 51237825 (+)
G1183875 NA other upstream 1061486 49882821 ~ 49883435 (+)
G1183819 NA other upstream 1109907 49832221 ~ 49835014 (+)
ndua4 ndua4 other upstream 1360359 49580324 ~ 49584562 (+)
G1182742 NA other upstream 1518698 49419570 ~ 49426223 (+)
LOC110486677 LOC106601591 other upstream 1661418 49281106 ~ 49284116 (+)
G1184435 LOC106606845 other downstream 39678 50985813 ~ 50986566 (+)
G1185436 NA other downstream 499772 51445907 ~ 51446557 (+)
G1185521 NA other downstream 681547 51627682 ~ 51628676 (+)
G1185527 NA other downstream 705478 51651613 ~ 51653770 (+)

Expression


Co-expression Network