G1185154


Basic Information

Item Value
gene id G1185154
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 50990373 ~ 50991627 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351573
CAAGACAAAGTCTGTAGTACAAATCCTGAATTGAACCATAAGATCTCCACTAACATTGTTTGAGTCCACCTCAATTTCAGATCCAGCCGGAGTTTCATATTGGTACACATATCCAATTCCGTCCTCAAATCTTCACACCTGTCCATTTTCTTGATGGGAGAGCACGCTAAGCAAGCTACGGAAGAAGACATTCATTTAGTACAACTTTCTATCAACCGTCTACACAGGCAAACTACTGAGGGAGAGGCATCATGTACCAATCTATCAACCGTCTACACAGGCAAACTGAGGGAGAGGCATCATGTACCAATCTATCAACCGTCTACACAGACAAACTACTGAGGGAGAGGCATCATGTACCAATCTATCAACCGTCTACACAGACAAACTACTGAGGGAGAGGCATCATGTACCAATCTATCAACCGTCTACACAGGCAAACCACTGAGGGAGAGGCATCATGTACCAATCTATCAACCGTCTACACAGACAAACTACTGAGGGAGAGGCATCATGTACCAATCTATCAACCGTCTACACAGACAAACTACTGAGGGAGAGGCATCATGTACCAATCTATCAACCGTCTACACAGACAAACTACTGAGGGAGAGGCATCATGTACCAATCTATCAACCGTCTACACAGACAAACTACTGAGGGAGAGGCATCATGTACCAATCTATCAACCGTCTACACAGGGAAACTGAGGGAGAGGCATCACATACCAATCTATCAACCATCTACACAGGGAAACTGAGGGAGAGGCATCACATACCAATCTATCAACCGTCTACACAGGGAAACTGAGGGAGAGGCATCACATACCAATCTATCAACCATCTACACAGGCAAACTCagcccacctgtctgtctgtccttcagtCCATCTGTATGAAGTACATAAAAGTATCACTACCACAGACAAAATGTATGGGAAATGTCCATATCAGTAAACTCATTCTCCTccacatactataccataccatcaTTGTCTACTGTGTGTTACGGGTGAACACATCAGACATCCAAttaagacagacatactgtacagtactttggACTCAGTACAGCTGTGTACATGATCACATCTGTGAGGGCTACTGTAGAAACCAGGAGCCTTAGTgtggcacgtgtgtgtgtgtg

Function

NR:

description
uncharacterized protein LOC109884029 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351573 True 1146 lncRNA 0.45 2 50990373 50991627

Neighbor

gene id symbol gene type direction distance location
LOC110486730 tmed1 coding downstream 106679 50876515 ~ 50883694 (-)
LOC118938315 NA coding downstream 121629 50867328 ~ 50868744 (-)
LOC110486728 qtrt1 coding downstream 157665 50827395 ~ 50832708 (-)
LOC110485208 LOC106606837 coding downstream 165940 50732097 ~ 50824433 (-)
LOC118938085 NA coding downstream 260278 50719812 ~ 50730095 (-)
LOC110485210 adgrl1 coding upstream 18992 51010619 ~ 51230197 (-)
LOC110486734 LOC106606824 coding upstream 333279 51324906 ~ 51329316 (-)
LOC110486738 LOC106606773 coding upstream 413630 51405257 ~ 51412417 (-)
LOC110486740 LOC106606777 coding upstream 430963 51422590 ~ 51424573 (-)
LOC110486741 erf3b coding upstream 436058 51427685 ~ 51441706 (-)
G1185123 NA non-coding downstream 53789 50936358 ~ 50936584 (-)
G1185048 NA non-coding downstream 203573 50785477 ~ 50786800 (-)
G1185012 NA non-coding downstream 281246 50708892 ~ 50709127 (-)
G1184978 NA non-coding downstream 281655 50707867 ~ 50708718 (-)
G1185128 NA non-coding upstream 11864 51003491 ~ 51007735 (-)
G1185194 NA non-coding upstream 72496 51064123 ~ 51082403 (-)
G1185256 NA non-coding upstream 181421 51173048 ~ 51173497 (-)
G1185260 NA non-coding upstream 189179 51180806 ~ 51185965 (-)
G1185261 NA non-coding upstream 189831 51181458 ~ 51188001 (-)
G1185046 NA other downstream 208515 50780265 ~ 50781858 (-)
G1184986 NA other downstream 361834 50626647 ~ 50628539 (-)
LOC110486698 LOC106601594 other downstream 1154041 49831067 ~ 49853671 (-)
G1183706 NA other downstream 1301917 49685338 ~ 49688456 (-)
G1186080 NA other upstream 330173 51321800 ~ 51323931 (-)
G1186075 NA other upstream 360682 51352309 ~ 51373954 (-)
G1186154 NA other upstream 498150 51489777 ~ 51490241 (-)
G1186381 NA other upstream 933336 51924963 ~ 52030660 (-)
G1186216 NA other upstream 1019063 52010690 ~ 52011211 (-)

Expression


Co-expression Network