G1185128


Basic Information

Item Value
gene id G1185128
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51003491 ~ 51007735 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351544
agagttgactgatgagaccagacagtcagaatgacaggcagagttGACTGATGAGACCAGAATGTCAGAATGTAGCGTTGCCGTATTAAAGCGTTTCCAGAGAGAAACCATCCATCAAACCAGAGATGTATTCATGAGGTTCCTTCCCCCTAAAGTCTGTCCCAACCTTAAAAATCTGAGACTTTTGCCATTCtctttatttatgtatttttctaATGCTTTATTTATCtctatatttatttatgtatttggaatatttatttctatgTTCATTTATTCATgctttattttgtttttttcaaGATCTCTGTACATAGCTGAGCTGTGCGATGCGAATGCTGAAGTAAGCCCATTTAAATGTGCAGTACATTTAGGCAAGTAGATGGTTTCTCCAGCGTCCACTTCAGGGTGACATTTGGTTAGGGCCTGGGTGTCCCACTTCTTCCTAAAGAGTCCTAAAGGGCACATTGAGTTTAGTTGTGGATCTTAGGGGAGAAAGGGAAGGATTGAGAGCCATTTCCATTTCTTCTTGGTAGAAGAATCTCTCTTAGTTCAGACTCAGATAGGAGGCCCAGGTGTTCTACAGGAGGCATGTGTGCAATACTCTGCTGGTGTGTCTGACTTGGTTTAACATTGGAAACGGCCTGGTAGGGTAGTGTTACTATATGCCTACCACTGGACCgctgtgtatgtctgtgtttaCAGAAGGATCTGATAATTATGCACATTTTCTTTTGCTTGTTACTGGAAATATTAATTCAACATTGGCCTTGCAGCTCATAGTTAATTCAATAGGAGCATTGACCGGTCAGCAATGGACAATTGAATGTATGTTGACTAGAAGGAATAAAGAAAGTGAATTAATTGCCTACACTGACCGCCATCATTATCATCACATCACCACCTACACCTTTATTGATGTGATCTTCAAAGTTGACCTTTAGCTGGTAACCTCACAGGGACAGACACTGTGCACGGACAGACTCACCAGGAGGGGAAGAACCTTCATCACCATCTCCTGtgtaggctctctctctctcccctcacctctctctctctctctctctctctctcttccctcacctctctctctctcttctctctctctctcttccctcacctctctcactccatcccatCTGAATCCACCAGTGAGCTCCCTTTTAGCCCAGCATTAATCCCAGAGTTTTGTTTGGAGTTCATTTGTTTGTCTTAAGCTTTGTTTAAACCAGATTGATATCTCAATAAACAGTGGAGCCGTACTGTATTGTGGTAATGCTAGTGATTATACAGCAGAAAGCACTGTAGGACCCAGAGACCTGCTCAATGGGAGTTTCACCCCCATCTAAATCCCTATGTTACCTCTGATTAGGATAATAACACTGGCTAATCATTTACTGTGCTGAGACCACAGAGGGagagacctctctctctcacttccatcCCACTACTCCCTGTCCGTGCATCTAGCCCCTACCTCCATGTGTGCAGGCAGGTGGATTGAAGGTTCTTATAGGATAGAGTTGGAGTCAGTCTGTCCCTTAAGTCTGCGGCCCCTGCAGCTCTACCCCAGTAGAACAGTCATCTCTCAGTGTTTCAATAGACAGCGGAGGACACTGTGATCTGACAGTAACGTTGCCCTGCTGCTGACCTTCTCAGATGGACTGTTTCTCTCCCAGGTCTGTGATGCCCATATCCTGTGACCTCTGCGTTAGTGTGAAAACATGTCAGTGGTTCCTCTGCAgcggagtggaggagaggagaggaggagcactgGGTCAGGTAGTCTATCCCCAGGGAACTGCCATAAAGGGAGCGGTGTCAGGACATGTGATGTCACAGTTAGCcagggacagagtgtgtgtggggggatgaGTGTCAGTGTGCCTGTGTGTTCGTGCAAGGTTATACAGGAAGCAGAGATAAGGATGTGACGTATTGTTCTAGATGCCTTACTGTTGCTGTGGTGAGGAGTCAGGAGGTTCCAGTTCATCAACTAACCAGGCGCATTAGATCAACTCCACTGGCCTCACAAACCCATTGTAACAGTAACACAGAGGTCTCTGTCTGTGTAGTGAAATTATTGAGATATAATAGGAATCAACTGCCACATCTACTGGACAAGGGAGATTTTCAGAGTGATAAGGAATGCAGCAGGCTTTCCTATATGAAATTAGTACTATTTTGTTATTGGTCTCTTGTTACGTGTCcacatgactatatacagtacatatatcaTAGTTTTAAGAATATGTGGGAGTATGATTACACAAATGCAGTGACAAGGATTGTGCTGTTTATTTTTGTGTTGGGTAACTGTCCGTCCATGGAGCTGAGTTATGGCTCAAAGCGGCGGCCATCTTTTATACACAGGGTGGGACTACAACAGATGGATTTCTGGGTAGGGTAGGCTGGGTACTCTACACCCGGAACCTCTGGTCCAAAATcaaaagacaacacacacacacatactacacgcATAGTAACACACATACATGTCCAGTCAGGTTAGGTAGTTTAAACTACTGTGTACAGTGAAGTGGCGCTAGAGATCATAAAAGATCATAAGGGATTTACCGTTTACATGTTTAAAGTCGATCCACGTAACCGTAGGAGCTAGGAGCAGGCTGACGTTGACCTATTCATTTTTGTAGGCATGTTTTTCTATTTCTGAATACACATCCCAGTACTCTGGCTCCTCTGACTGTGTGACTCTGATCTGAACTGTGTCTGAAACTCTGCATGTGTGGATGACTAACGCTATGGGACACTGATGAACCATCTCTGTGGTGAGCAGCTCCATGGGACACACATACTCCCCACGAGGCTGACTGGTCACTGTAGGCTAGAGATGCTGGTCTAAGTGGCCAGCCACCTATCGAGGTCTATTGGTGAGTGTTCTGCATGGCTGTAAGTGTACAAGGGCAGGGTCTGGGAAATGTGCATGAGATGTTctgggctctatacagtaggagGGTCTGTGATGCTGTTAGTTGCAGGTCAGTATGTTCATTGGTCAGACCCAGCCAGACAGTATTAGACATTAGGAATGACCAGACAGGTAGACAGTCTAAGGCAGAGAAGTGTTGGTAAGAGATGAGTGACGACTGGTAGAACTATTGCTGGGTGTATGGATGGAAGGGCTCAGTTTGGGAGGTTCATCATCAGTAGGACCTTTGAGGACGGAGTACTGATCGTGTGCCATTGGGGTGATGATAATGTGTACATCTCCATTTAGAGTACTTCTCTTAGATTTTACTATGATGGGTTTTTCTCCATTCATTTATTCTGTACTTCTGAATCCTTTCTAAAGAGAGGTTGATGTAAAACCTTGATTCAGTTTTGTTCTTTTTTTATTTGAGGACTGATGTGTGATTCTTTTCTCACGTCATTGCTTTGacagctgtctgtctatctgggcCAAAGGGGGTGGTGGTTTTCTGTGAGCGTTTGCGTCATCGCAGGTCAGCGCGACCCTGTATCAGCACATATTAATAAAAAACTATTTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351544 True 3512 lncRNA 0.45 2 51003491 51007735

Neighbor

gene id symbol gene type direction distance location
LOC110486730 tmed1 coding downstream 119797 50876515 ~ 50883694 (-)
LOC118938315 NA coding downstream 134747 50867328 ~ 50868744 (-)
LOC110486728 qtrt1 coding downstream 170783 50827395 ~ 50832708 (-)
LOC110485208 LOC106606837 coding downstream 179058 50732097 ~ 50824433 (-)
LOC118938085 NA coding downstream 273396 50719812 ~ 50730095 (-)
LOC110485210 adgrl1 coding upstream 2884 51010619 ~ 51230197 (-)
LOC110486734 LOC106606824 coding upstream 317171 51324906 ~ 51329316 (-)
LOC110486738 LOC106606773 coding upstream 397522 51405257 ~ 51412417 (-)
LOC110486740 LOC106606777 coding upstream 414855 51422590 ~ 51424573 (-)
LOC110486741 erf3b coding upstream 419950 51427685 ~ 51441706 (-)
G1185154 NA non-coding downstream 11864 50990373 ~ 50991627 (-)
G1185123 NA non-coding downstream 66907 50936358 ~ 50936584 (-)
G1185048 NA non-coding downstream 216691 50785477 ~ 50786800 (-)
G1185012 NA non-coding downstream 294364 50708892 ~ 50709127 (-)
G1185194 NA non-coding upstream 56388 51064123 ~ 51082403 (-)
G1185256 NA non-coding upstream 165313 51173048 ~ 51173497 (-)
G1185260 NA non-coding upstream 173071 51180806 ~ 51185965 (-)
G1185261 NA non-coding upstream 173723 51181458 ~ 51188001 (-)
G1185300 NA non-coding upstream 236088 51243823 ~ 51244071 (-)
G1185046 NA other downstream 221633 50780265 ~ 50781858 (-)
G1184986 NA other downstream 374952 50626647 ~ 50628539 (-)
LOC110486698 LOC106601594 other downstream 1167159 49831067 ~ 49853671 (-)
G1183706 NA other downstream 1315035 49685338 ~ 49688456 (-)
G1186080 NA other upstream 314065 51321800 ~ 51323931 (-)
G1186075 NA other upstream 344574 51352309 ~ 51373954 (-)
G1186154 NA other upstream 482042 51489777 ~ 51490241 (-)
G1186381 NA other upstream 917228 51924963 ~ 52030660 (-)
G1186216 NA other upstream 1002955 52010690 ~ 52011211 (-)

Expression


Co-expression Network