G1185298


Basic Information

Item Value
gene id G1185298
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51243428 ~ 51243716 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351728
aaaacacacatcacaacaagagagacacaacactacatgaagagagacctaagacaacaacataacaaggtGGCAACACATGACATCACAGCATGGTAgctacacaacatgacaacaacatggtagcaacacaaaaacaTGGTGCAAACGTTATTGGgcaaagtcaacagcacaaagggcaagaaggtaaagacaacaatacatcacacaaagcagctacaactgtcagtaagagtgtcagtaagagtgtccatgattgagtctttgaatgaagagattgagataaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351728 True 289 lncRNA 0.40 1 51243428 51243716

Neighbor

gene id symbol gene type direction distance location
LOC110486733 LOC106606838 coding upstream 250586 50991494 ~ 50992842 (+)
LOC110485209 LOC105013079 coding upstream 278211 50939574 ~ 50965217 (+)
LOC110486729 light coding upstream 348949 50885729 ~ 50894479 (+)
dnm2a NA coding upstream 367126 50832804 ~ 50876302 (+)
LOC110486723 LOC106601660 coding upstream 523609 50715377 ~ 50719819 (+)
LOC110486735 LOC100380774 coding downstream 100662 51344378 ~ 51373991 (+)
LOC110487554 LOC106601638 coding downstream 148144 51384172 ~ 51394113 (+)
LOC110486737 LOC106606772 coding downstream 150720 51394436 ~ 51404580 (+)
LOC110486745 LOC106601712 coding downstream 318648 51562364 ~ 51566331 (+)
LOC110486751 LOC106606781 coding downstream 342530 51586246 ~ 51590496 (+)
G1185289 NA non-coding upstream 5603 51237617 ~ 51237825 (+)
G1185285 NA non-coding upstream 10990 51232002 ~ 51232438 (+)
G1185283 NA non-coding upstream 12689 51230468 ~ 51230739 (+)
G1184575 NA non-coding upstream 32509 51210409 ~ 51210919 (+)
G1184443 NA non-coding upstream 235449 51003517 ~ 51007979 (+)
G1185301 NA non-coding downstream 719 51244435 ~ 51244644 (+)
G1185311 NA non-coding downstream 15154 51258870 ~ 51259092 (+)
G1185318 NA non-coding downstream 21799 51265515 ~ 51266166 (+)
G1185320 NA non-coding downstream 22793 51266509 ~ 51266852 (+)
G1185323 NA non-coding downstream 24991 51268707 ~ 51269083 (+)
G1184435 LOC106606845 other upstream 256862 50985813 ~ 50986566 (+)
G1183875 NA other upstream 1359993 49882821 ~ 49883435 (+)
G1183819 NA other upstream 1408414 49832221 ~ 49835014 (+)
ndua4 ndua4 other upstream 1658866 49580324 ~ 49584562 (+)
G1182742 NA other upstream 1817205 49419570 ~ 49426223 (+)
G1185436 NA other downstream 202191 51445907 ~ 51446557 (+)
G1185521 NA other downstream 383966 51627682 ~ 51628676 (+)
G1185527 NA other downstream 407897 51651613 ~ 51653770 (+)
G1185522 NA other downstream 450167 51693883 ~ 51695058 (+)

Expression


Co-expression Network