G1185318


Basic Information

Item Value
gene id G1185318
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51265515 ~ 51266166 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351748
cctgtactGTGAaacatttgtccattattctttCAAGAATTATTCAAGAtctgtcaaggtgttggggatcatggctacatagccattttaaagtcttgccttagattttcaagtagatttacagtggggcaaaaaagtatttagtcagccaccaaatgtgcaagttctcccacttaaaaagatgagagaggtctgtaattttcatcataggtacacttcaactatgacagacaaaatgagaaaaataattccagaaaatcacattgtaggattttttatgaatttatttgcaaattatggtggaagataagtatttggtcacctacaaacaagcaagatttctggctctcacagacctgtaacttcttctttaagaggctcctctgtcctccactcgttacctgtattaatggcacctgtttgaacttgttatcagtataaaagacacctgtccacaacctcaaacagtcacaatccaaactccactatggccaagaccaaagacctgcaccaggctgggaagactgaatctgcaataggtaagcagcttggtttgaagaaatcaactgtgggagcaattattaggaaatggaagacatacaagaccactgataatctccctcgatctggggctccacgcaagatttcaccc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351748 True 652 lncRNA 0.39 1 51265515 51266166

Neighbor

gene id symbol gene type direction distance location
LOC110486733 LOC106606838 coding upstream 272673 50991494 ~ 50992842 (+)
LOC110485209 LOC105013079 coding upstream 300298 50939574 ~ 50965217 (+)
LOC110486729 light coding upstream 371036 50885729 ~ 50894479 (+)
dnm2a NA coding upstream 389213 50832804 ~ 50876302 (+)
LOC110486723 LOC106601660 coding upstream 545696 50715377 ~ 50719819 (+)
LOC110486735 LOC100380774 coding downstream 78212 51344378 ~ 51373991 (+)
LOC110487554 LOC106601638 coding downstream 125694 51384172 ~ 51394113 (+)
LOC110486737 LOC106606772 coding downstream 128270 51394436 ~ 51404580 (+)
LOC110486745 LOC106601712 coding downstream 296198 51562364 ~ 51566331 (+)
LOC110486751 LOC106606781 coding downstream 320080 51586246 ~ 51590496 (+)
G1185311 NA non-coding upstream 6423 51258870 ~ 51259092 (+)
G1185301 NA non-coding upstream 20871 51244435 ~ 51244644 (+)
G1185298 NA non-coding upstream 21799 51243428 ~ 51243716 (+)
G1185289 NA non-coding upstream 27690 51237617 ~ 51237825 (+)
G1185285 NA non-coding upstream 33077 51232002 ~ 51232438 (+)
G1185320 NA non-coding downstream 343 51266509 ~ 51266852 (+)
G1185323 NA non-coding downstream 2541 51268707 ~ 51269083 (+)
G1185327 NA non-coding downstream 5313 51271479 ~ 51271714 (+)
G1185342 NA non-coding downstream 19464 51285630 ~ 51285849 (+)
G1185343 NA non-coding downstream 19792 51285958 ~ 51286234 (+)
G1184435 LOC106606845 other upstream 278949 50985813 ~ 50986566 (+)
G1183875 NA other upstream 1382080 49882821 ~ 49883435 (+)
G1183819 NA other upstream 1430501 49832221 ~ 49835014 (+)
ndua4 ndua4 other upstream 1680953 49580324 ~ 49584562 (+)
G1182742 NA other upstream 1839292 49419570 ~ 49426223 (+)
G1185436 NA other downstream 179741 51445907 ~ 51446557 (+)
G1185521 NA other downstream 361516 51627682 ~ 51628676 (+)
G1185527 NA other downstream 385447 51651613 ~ 51653770 (+)
G1185522 NA other downstream 427717 51693883 ~ 51695058 (+)

Expression


Co-expression Network