Gene
RNA
| Item | Value |
|---|---|
| gene id | G1185343 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 51285958 ~ 51286234 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tomoregulin-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1351773 | True | 277 | lncRNA | 0.48 | 1 | 51285958 | 51286234 |
51,284,800
51,285,200
51,285,600
51,286,000
51,286,400
51,286,800
51,287,200
51,287,600
51,288,000
51,288,400
51,288,800
51,289,200
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486733 | LOC106606838 | coding | upstream | 293116 | 50991494 ~ 50992842 (+) |
| LOC110485209 | LOC105013079 | coding | upstream | 320741 | 50939574 ~ 50965217 (+) |
| LOC110486729 | light | coding | upstream | 391479 | 50885729 ~ 50894479 (+) |
| dnm2a | NA | coding | upstream | 409656 | 50832804 ~ 50876302 (+) |
| LOC110486723 | LOC106601660 | coding | upstream | 566139 | 50715377 ~ 50719819 (+) |
| LOC110486735 | LOC100380774 | coding | downstream | 58144 | 51344378 ~ 51373991 (+) |
| LOC110487554 | LOC106601638 | coding | downstream | 105626 | 51384172 ~ 51394113 (+) |
| LOC110486737 | LOC106606772 | coding | downstream | 108202 | 51394436 ~ 51404580 (+) |
| LOC110486745 | LOC106601712 | coding | downstream | 276130 | 51562364 ~ 51566331 (+) |
| LOC110486751 | LOC106606781 | coding | downstream | 300012 | 51586246 ~ 51590496 (+) |
| G1185342 | NA | non-coding | upstream | 109 | 51285630 ~ 51285849 (+) |
| G1185327 | NA | non-coding | upstream | 14244 | 51271479 ~ 51271714 (+) |
| G1185323 | NA | non-coding | upstream | 16875 | 51268707 ~ 51269083 (+) |
| G1185320 | NA | non-coding | upstream | 19106 | 51266509 ~ 51266852 (+) |
| G1185318 | NA | non-coding | upstream | 19792 | 51265515 ~ 51266166 (+) |
| G1185347 | NA | non-coding | downstream | 3576 | 51289810 ~ 51290250 (+) |
| G1185366 | NA | non-coding | downstream | 27532 | 51313766 ~ 51313985 (+) |
| G1185435 | NA | non-coding | downstream | 156683 | 51442917 ~ 51471830 (+) |
| G1185451 | NA | non-coding | downstream | 179109 | 51465343 ~ 51468001 (+) |
| G1184435 | LOC106606845 | other | upstream | 299392 | 50985813 ~ 50986566 (+) |
| G1183875 | NA | other | upstream | 1402523 | 49882821 ~ 49883435 (+) |
| G1183819 | NA | other | upstream | 1450944 | 49832221 ~ 49835014 (+) |
| ndua4 | ndua4 | other | upstream | 1701396 | 49580324 ~ 49584562 (+) |
| G1182742 | NA | other | upstream | 1859735 | 49419570 ~ 49426223 (+) |
| G1185436 | NA | other | downstream | 159673 | 51445907 ~ 51446557 (+) |
| G1185521 | NA | other | downstream | 341448 | 51627682 ~ 51628676 (+) |
| G1185527 | NA | other | downstream | 365379 | 51651613 ~ 51653770 (+) |
| G1185522 | NA | other | downstream | 407649 | 51693883 ~ 51695058 (+) |
