G1186080


Basic Information

Item Value
gene id G1186080
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51321800 ~ 51323931 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1352616
gaaatcttaccgctacagcatacaatgacattctagatgattctgtgcttccggCTATGTGGCAACAGTtcggagaaggccctttcctgtttcagcatgacaatgcccgcgtgcacaaagcaaggtccatgcaGGAATGgattgtcaagattggtgtggaagaacttgactggcctgcacagagcccgccctgacctcaaccccatcggatgcctttgggatgaattggaacgtcgactgcgagccaggcctaatcgcccaacatcagctcccgacctcactaatgctcttgtggctgaatggaagaagtccccgcaacaatgttccaacatctagtggaaagccttcccagaagagtggaggctgttatagcagataAGGGGGtactaactccatattaatgcccgtgattttggaatgagatgttctacgagcaggtgtccacatacgtttggtcaCGTAGTGTACCTGTCCATTACTGATGGCTGTCTCCCACCAGTCCCTTCTCTGTTATCCTTTCTTCTTgctgctctcttctctccctctttcccccgcTTGGCTGTAAATTATTCAGCTCTTTCTTTCAAGGGGACCCCTCCCTCATCAGATCTGTGGGCCATCGAGTTTGCTGCCTCACCGCTCCTTCACCCCCAGCAACAGCCGTCCCCACGTCACCTCCTGACATTGAAGAAATCACAtgtccctcactctcttttctaccactctctctcgcttgcttGCTGTAAATTtagctctctcctccctttcaaCTTTCTCCCTCTCGTGTGTTACTTCCCCAACCTCCCTCTtttctctaccaccctctctgtttttctgtaaTGTCACGGCTCACTGCTGAGTGTCACGGAGTTGATGGAGAGGAAAAATAATGGAGGCGTGAGGCAATGGAAGGAGGGTTGAcgcaagggtgtgtgtgtgtgtgtacgttttgTGAAAGACTTGAGGAAGAGTTGAGGAAACGAGTGGGGGAGGGAGATTTGTCTGATGGTAAAATGTTCCAGCTCGGTGAAGAAACAGCAGACAGTCAGTCGATGCACCTCCCcctactataactactacagTTCCATGTAGACTGGTGCTACACACAGACTTCCCAAGTGATGGTCACTTACAGTCCCTCAAAATACCCCCCTCACCGAATCACATCTCTTTCTCATGTCCATCCTGGTAAACCTATGGTTTAATGCAACGTGTTGTTTACAATGTTATCAGCAACCTCTGACAGTGAGTAACACTTTTGTTGGATGATTACACGACATTACGTGGGATAATACAATTTGAACAGGTTGTTTCCATTCTCCCTTTTCATATTCATCTCATATTCTGTTGATCTATTTCATGCTTTAGTGTGTAGTTCAGAACTCTAACTCTGGTAGATTAGTAAATGCCTGTTTTGATTGTAcagagaactctctctctctcatatatattcAATTCAAAGGGATTTACTGACAtgagaaacatgtttacattgccaaagcaaatggaacagacagacaaagtaaacattgcactcacaagttaaaagaatatagacatttcaaattttatattattggctatgtacagtgttgtaacaatgtgcaggtagataaatataggttgtatttacaatgtttgcactccactggtttcccttttctcatggcaacgggcCAAAGATCTTGTTGCGACTGCACACTGCGGTATTTAGACTAACAAACGTTGATAAACTTCCATATCTGAGTTCTTTTCAAATTCTATGTGGGTTTgtgtgatctgtgggaaatatgtctctctctgAGGAGGAAGCTGGTGGGAAGAGATATATAGGAGGATGGGTTCATTgtaatggaacagtatcaaacatatggaaaccatttTCCATTTCagctattacaatgagcctgtcctcctacagctccacccaccagcctcctatgctctctctctctcccccctccctccccagacaGTCCTTGTTGTGTTTGGTTCATTGTGTTCCTGGCAGAAAGCAGTGAAGCAGACCCTAACAGTCCATTTTAGAAGCTGCCACTGTCTCTGATCTAAAACACAATCAGTGAGCCATTTTGCCAGGGTCCAACAGCAACATTAAAAAGTCAATACACGAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1352616 True 2132 TUCP 0.45 1 51321800 51323931

Neighbor

gene id symbol gene type direction distance location
LOC110485210 adgrl1 coding downstream 91603 51010619 ~ 51230197 (-)
LOC110486730 tmed1 coding downstream 438106 50876515 ~ 50883694 (-)
LOC118938315 NA coding downstream 453056 50867328 ~ 50868744 (-)
LOC110486728 qtrt1 coding downstream 489092 50827395 ~ 50832708 (-)
LOC110485208 LOC106606837 coding downstream 497367 50732097 ~ 50824433 (-)
LOC110486734 LOC106606824 coding upstream 975 51324906 ~ 51329316 (-)
LOC110486738 LOC106606773 coding upstream 81326 51405257 ~ 51412417 (-)
LOC110486740 LOC106606777 coding upstream 98659 51422590 ~ 51424573 (-)
LOC110486741 erf3b coding upstream 103754 51427685 ~ 51441706 (-)
LOC110486742 NA coding upstream 118956 51442887 ~ 51464818 (-)
G1185369 NA non-coding downstream 3201 51318273 ~ 51318599 (-)
G1185355 NA non-coding downstream 26277 51295271 ~ 51295523 (-)
G1185353 NA non-coding downstream 28993 51292541 ~ 51292807 (-)
G1185348 NA non-coding downstream 31426 51289769 ~ 51290374 (-)
G1185310 NA non-coding downstream 66054 51255513 ~ 51255746 (-)
G1186113 NA non-coding upstream 53526 51377457 ~ 51378219 (-)
G1186150 NA non-coding upstream 160359 51484290 ~ 51484518 (-)
G1186153 NA non-coding upstream 163570 51487501 ~ 51487704 (-)
LOC110486743 LOC106601710 non-coding upstream 179244 51470090 ~ 51508651 (-)
G1186175 NA non-coding upstream 209360 51533291 ~ 51533538 (-)
G1185046 NA other downstream 539942 50780265 ~ 50781858 (-)
G1184986 NA other downstream 693261 50626647 ~ 50628539 (-)
LOC110486698 LOC106601594 other downstream 1485468 49831067 ~ 49853671 (-)
G1183706 NA other downstream 1633344 49685338 ~ 49688456 (-)
G1186075 NA other upstream 28378 51352309 ~ 51373954 (-)
G1186154 NA other upstream 165846 51489777 ~ 51490241 (-)
G1186381 NA other upstream 601032 51924963 ~ 52030660 (-)
G1186216 NA other upstream 686759 52010690 ~ 52011211 (-)
G1186670 LOC100194703 other upstream 1335400 52659331 ~ 52659809 (-)

Expression


Co-expression Network