G1185486


Basic Information

Item Value
gene id G1185486
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51519328 ~ 51519548 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351929
atcagctggttgtacTGGTCTGAGGCTCCAGGAGGCACTGGGAGGGGCTGGGAGTGGACTTGTACCTTGTCTTCTGTTCTTGACATCTAGAATGACAACACAGTGGTGGAGGTGAAAACATAGAGGATGACTTGAAGCggctagagaggagaggatatataCCATGATCATGCTGCCAGGAGGCTCCTTCTTACTGGCAGGACAAGTCATGTGACTGAggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351929 True 221 lncRNA 0.51 1 51519328 51519548

Neighbor

gene id symbol gene type direction distance location
LOC110486737 LOC106606772 coding upstream 114748 51394436 ~ 51404580 (+)
LOC110487554 LOC106601638 coding upstream 125215 51384172 ~ 51394113 (+)
LOC110486735 LOC100380774 coding upstream 145337 51344378 ~ 51373991 (+)
LOC110486733 LOC106606838 coding upstream 526486 50991494 ~ 50992842 (+)
LOC110485209 LOC105013079 coding upstream 554111 50939574 ~ 50965217 (+)
LOC110486745 LOC106601712 coding downstream 42816 51562364 ~ 51566331 (+)
LOC110486751 LOC106606781 coding downstream 66698 51586246 ~ 51590496 (+)
LOC118938087 NA coding downstream 244033 51760793 ~ 51765924 (+)
LOC118938318 LOC106606767 coding downstream 264340 51783888 ~ 51823957 (+)
LOC118938088 NA coding downstream 320904 51840452 ~ 51852886 (+)
G1185470 NA non-coding upstream 25812 51493301 ~ 51493516 (+)
G1185467 NA non-coding upstream 29087 51489835 ~ 51490241 (+)
G1185466 NA non-coding upstream 29656 51489469 ~ 51489672 (+)
G1185464 NA non-coding upstream 32752 51485059 ~ 51486576 (+)
G1185457 NA non-coding upstream 37518 51476335 ~ 51481810 (+)
G1185487 NA non-coding downstream 281 51519829 ~ 51520150 (+)
G1185488 NA non-coding downstream 1382 51520930 ~ 51521165 (+)
G1185489 NA non-coding downstream 1962 51521510 ~ 51522015 (+)
G1185494 NA non-coding downstream 13608 51533156 ~ 51533540 (+)
G1185499 NA non-coding downstream 21308 51540856 ~ 51541134 (+)
G1185436 NA other upstream 72771 51445907 ~ 51446557 (+)
G1184435 LOC106606845 other upstream 532762 50985813 ~ 50986566 (+)
G1183875 NA other upstream 1635893 49882821 ~ 49883435 (+)
G1183819 NA other upstream 1684314 49832221 ~ 49835014 (+)
G1185521 NA other downstream 108134 51627682 ~ 51628676 (+)
G1185527 NA other downstream 132065 51651613 ~ 51653770 (+)
G1185522 NA other downstream 174335 51693883 ~ 51695058 (+)
G1185535 NA other downstream 178328 51697876 ~ 51698646 (+)
G1185616 NA other downstream 198200 51717748 ~ 51718204 (+)

Expression


Co-expression Network