G1185509


Basic Information

Item Value
gene id G1185509
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51553108 ~ 51553318 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351955
CTGCATATCTGTTCAATCCAAACTTACAACCAATTGATTGCAGCACTACCACAAAActggaggaggcaagtggaaaacTTAGAAGGAacttgtttgcctgccatatattaaagatacaaattggctgaaaggaacTGGCATAAATAGAATACTAGACCAGTTTCATCTGAGGACAAATGTTGACAGCTGCGCCATACAGGGTGCAACATAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351955 True 211 lncRNA 0.40 1 51553108 51553318

Neighbor

gene id symbol gene type direction distance location
LOC110486737 LOC106606772 coding upstream 148528 51394436 ~ 51404580 (+)
LOC110487554 LOC106601638 coding upstream 158995 51384172 ~ 51394113 (+)
LOC110486735 LOC100380774 coding upstream 179117 51344378 ~ 51373991 (+)
LOC110486733 LOC106606838 coding upstream 560266 50991494 ~ 50992842 (+)
LOC110485209 LOC105013079 coding upstream 587891 50939574 ~ 50965217 (+)
LOC110486745 LOC106601712 coding downstream 9046 51562364 ~ 51566331 (+)
LOC110486751 LOC106606781 coding downstream 32928 51586246 ~ 51590496 (+)
LOC118938087 NA coding downstream 210263 51760793 ~ 51765924 (+)
LOC118938318 LOC106606767 coding downstream 230570 51783888 ~ 51823957 (+)
LOC118938088 NA coding downstream 287134 51840452 ~ 51852886 (+)
G1185507 NA non-coding upstream 1883 51550964 ~ 51551225 (+)
G1185505 NA non-coding upstream 3579 51549314 ~ 51549529 (+)
G1185501 NA non-coding upstream 9047 51543784 ~ 51544061 (+)
G1185499 NA non-coding upstream 11974 51540856 ~ 51541134 (+)
G1185494 NA non-coding upstream 19568 51533156 ~ 51533540 (+)
G1185510 NA non-coding downstream 382 51553700 ~ 51553936 (+)
G1185534 LOC106606779 non-coding downstream 6403 51559721 ~ 51561367 (+)
G1185564 carm1 non-coding downstream 20703 51574021 ~ 51576755 (+)
G1185578 NA non-coding downstream 50752 51604070 ~ 51720989 (+)
G1185623 NA non-coding downstream 178643 51731961 ~ 51736516 (+)
G1185436 NA other upstream 106551 51445907 ~ 51446557 (+)
G1184435 LOC106606845 other upstream 566542 50985813 ~ 50986566 (+)
G1183875 NA other upstream 1669673 49882821 ~ 49883435 (+)
G1183819 NA other upstream 1718094 49832221 ~ 49835014 (+)
G1185521 NA other downstream 74364 51627682 ~ 51628676 (+)
G1185527 NA other downstream 98295 51651613 ~ 51653770 (+)
G1185522 NA other downstream 140565 51693883 ~ 51695058 (+)
G1185535 NA other downstream 144558 51697876 ~ 51698646 (+)
G1185616 NA other downstream 164430 51717748 ~ 51718204 (+)

Expression


Co-expression Network