G1185535


Basic Information

Item Value
gene id G1185535
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51697876 ~ 51698646 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351994
AAATAAAGATACATCAAAAAATATCAAAGGTGAACTATGGGTGTATATCAAAGCCTCTTGTGATTGGTCCTCCCAGTAAGGAGGAGCTCATGCAAATACTCTAGTCCTGCCTCTTTATTAATGTCTCTGTTGAAGGTTGTTTCTGCTGAGGACTGTCTCAACTACCTTTAGAGAACAACACAGATCACCATGTTTCCTACCACAGGAATACTCTTACTGACAGTCTATCTAACAGGTGTTCAGGGTCAGACACTGACTGAGTCTGGACCAGTGGTTAAACATCCTGGAGAATCACACAAACTGACCTGTACAGGCTCTGGGTTCACATTCAGTAGCTATGGGATGAACTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCTTATAGTTATAGTACTACTGCTGACTACTCCCAGTCATTTCAGGGTAGATTCACCATCTCCAGAGATGGCTCCAGCAGTAAGCTGTACCTACAGATGAACAGTCTGAGGAGTGAGGACACAGCAGTATATTACTGTGCCCGGTACACACAGTGAGAGATAGTGGTGAGAGAGCTGTACAAAAACCACTTCCCCATGGAACACAGAcaaccaaatgtatttatgaTGAATGGTTTAATAGCAGAAGCTCAGCCATACtttaaacacatacatacatacataca

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351994 True 671 TUCP 0.43 2 51697876 51698646

Neighbor

gene id symbol gene type direction distance location
LOC110486751 LOC106606781 coding upstream 107380 51586246 ~ 51590496 (+)
LOC110486745 LOC106601712 coding upstream 131545 51562364 ~ 51566331 (+)
LOC110486737 LOC106606772 coding upstream 293296 51394436 ~ 51404580 (+)
LOC110487554 LOC106601638 coding upstream 303763 51384172 ~ 51394113 (+)
LOC110486735 LOC100380774 coding upstream 323885 51344378 ~ 51373991 (+)
LOC118938087 NA coding downstream 64935 51760793 ~ 51765924 (+)
LOC118938318 LOC106606767 coding downstream 85242 51783888 ~ 51823957 (+)
LOC118938088 NA coding downstream 141806 51840452 ~ 51852886 (+)
LOC110486748 NA coding downstream 237396 51779397 ~ 51941040 (+)
LOC110486763 NA coding downstream 253470 51952116 ~ 51954859 (+)
G1185564 carm1 non-coding upstream 121121 51574021 ~ 51576755 (+)
G1185534 LOC106606779 non-coding upstream 136509 51559721 ~ 51561367 (+)
G1185510 NA non-coding upstream 143940 51553700 ~ 51553936 (+)
G1185509 NA non-coding upstream 144558 51553108 ~ 51553318 (+)
G1185507 NA non-coding upstream 146651 51550964 ~ 51551225 (+)
G1185623 NA non-coding downstream 33315 51731961 ~ 51736516 (+)
G1185538 NA non-coding downstream 163947 51862593 ~ 51864290 (+)
G1185714 NA non-coding downstream 226443 51925089 ~ 51930454 (+)
G1185722 NA non-coding downstream 257524 51956170 ~ 52023060 (+)
G1185522 NA other upstream 2818 51693883 ~ 51695058 (+)
G1185527 NA other upstream 44106 51651613 ~ 51653770 (+)
G1185521 NA other upstream 69200 51627682 ~ 51628676 (+)
G1185436 NA other upstream 251319 51445907 ~ 51446557 (+)
G1185616 NA other downstream 19102 51717748 ~ 51718204 (+)
G1185539 NA other downstream 35003 51733649 ~ 51734324 (+)
G1185530 NA other downstream 132144 51830790 ~ 51847380 (+)
G1185531 NA other downstream 170655 51869301 ~ 51880953 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) LOC120574376 NA misc NC_053126.1 CM020923.1 9443243 ~ 9443724 (-)
tiger barb (Puntius tetrazona) trnas-uga_78 NA coding NC_056702.1 CM032071.1 26521347 ~ 26521428 (+)
mexican tetra (Astyanax mexicanus) LOC111190147 NA misc NW_019172441.1 APWO02002039.1 97575 ~ 100328 (+)